RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PALM2Q8IXS6 379 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 NAT8LQ8N9F0 302 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 OR2L3Q8NG85 312 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 OR9A1PQ8NGU1 263 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 INPP5DQ92835 1189 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 SLCO2A1Q92959 643 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 MS4A14Q96JA4 679 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 IL17FQ96PD4 163 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 RUFY1Q96T51 708 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 EBNA1BP2Q99848 306 aaKnown RBP8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 SPRTNQ9H040 489 aaPredicted RBP8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 AKIRIN1Q9H9L7 192 aaPredicted RBP8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 CUTCQ9NTM9 273 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 GPR83Q9NYM4 423 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 C5AR2Q9P296 337 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 CDC14AQ9UNH5 594 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 SEC16AO15027 2179 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 FLNBO75369 2602 aaKnown RBP8.71□□□□□ -1.01
SNORD88A-201ENST00000408314 FITM1A5D6W6 292 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 GOLGA8KD6RF30 607 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 GOLGA8TH3BQL2 631 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 DNALI1O14645 258 aaPredicted RBP8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 PCDH17O14917 1159 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 CEACAM4O75871 244 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 ONECUT2O95948 504 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 ERGP11308 486 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 HRH2P25021 359 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 GRIA3P42263 894 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 SLC1A2P43004 574 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 PAFAH1B1P43034 410 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 CCL11P51671 97 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 EMP3P54852 163 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 FOXK1P85037 733 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 SP140Q13342 867 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 ATP1A4Q13733 1029 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 MUM1Q2TAK8 710 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 KLHL38Q2WGJ6 581 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 SPANXN3Q5MJ09 141 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 RNASEH2BQ5TBB1 312 aaKnown RBP8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 VWA5B1Q5TIE3 1220 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 C1orf189Q5VU69 101 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 CPZQ66K79 652 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 MRPL14Q6P1L8 145 aaKnown RBP8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 RNF44Q7L0R7 432 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 KCNMB4Q86W47 210 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 REXO1L1PQ8IX06 675 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 PDIK1LQ8N165 341 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 C2orf73Q8N5S3 287 aaPredicted RBP8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 OR2A1Q8NGT9 310 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 COG1Q8WTW3 980 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 RERGQ96A58 199 aaPredicted RBP8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 LRRC39Q96DD0 335 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 MVB12AQ96EY5 273 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 ZNF285Q96NJ3 590 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 NRTNQ99748 197 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 MIPEPQ99797 713 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 ZFYVE21Q9BQ24 234 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 TRIM55Q9BYV6 548 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 SLC29A3Q9BZD2 475 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 PCBD2Q9H0N5 130 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 SLC26A1Q9H2B4 701 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 MLXIPLQ9NP71 852 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 MRPS30Q9NP92 439 aaKnown RBP8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 TAS2R13Q9NYV9 303 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 DHCR7Q9UBM7 475 aaKnown RBP8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 RNF14Q9UBS8 474 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 PCYOX1Q9UHG3 505 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 TRMT6Q9UJA5 497 aaKnown RBP8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 FBXO5Q9UKT4 447 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 CORO1CQ9ULV4 474 aaPredicted RBP8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 NEU2Q9Y3R4 380 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 NFS1Q9Y697 457 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 ASH1LQ9NR48 2969 aaKnown RBP8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 TENM4Q6N022 2769 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 SPTBP11277 2137 aa8.71□□□□□ -1.02
SNORD88A-201ENST00000408314 ZCWPW2A0A1B0GU75 182 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 OR2A25A4D2G3 310 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 TTLL8A6PVC2 850 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 ARHGEF33A8MVX0 844 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 CCDC188H7C350 402 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 PRICKLE3O43900 615 aaPredicted RBP8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 VPS4BO75351 444 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 KLF7O75840 302 aaPredicted RBP8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 DNAJB5O75953 348 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 SYF2O95926 243 aaKnown RBP8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 C8GP07360 202 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 EZRP15311 586 aaKnown RBP8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 MMP11P24347 488 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 CCND1P24385 295 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 GCGRP47871 477 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 CARSP49589 748 aaKnown RBP8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 CLCN7P51798 805 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 PNLIPRP1P54315 467 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 VSX2P58304 361 aaPredicted RBP8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 GNG11P61952 73 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 RELAQ04206 551 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 OCA2Q04671 838 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 CHAF1BQ13112 559 aa8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 TSTA3Q13630 321 aaPredicted RBP8.7□□□□□ -1.02
SNORD88A-201ENST00000408314 CRYMQ14894 314 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms