RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 CD22P20273 847 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 PAX7P23759 505 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 FCARP24071 287 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 SOX11P35716 441 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 GPR1P46091 355 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 HNRNPFP52597 415 aaKnown RBP16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 DOC2AQ14183 400 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 CCSMST1Q4G0I0 132 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 LRIF1Q5T3J3 769 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 TMTC4Q5T4D3 741 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 SPRED1Q7Z699 444 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 CARM1Q86X55 608 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 ZNF548Q8NEK5 533 aaPredicted RBP16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 MED8Q96G25 268 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 ITCHQ96J02 903 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 TSSK3Q96PN8 268 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 THUMPD3Q9BV44 507 aaKnown RBP16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 PAIP1Q9H074 479 aaKnown RBP16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 DZANK1Q9NVP4 752 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 ARHGAP10A1A4S6 786 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 C1QTNF3-AMACRE9PGA6 284 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 H0YIV9 168 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 MMP20O60882 483 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 HSD3B1P14060 373 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 TACR1P25103 407 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 HSD3B2P26439 372 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 PDHA2P29803 388 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 GRIA2P42262 883 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 GTF2H3Q13889 308 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 GK3PQ14409 553 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 LIN52Q52LA3 116 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 ATG9BQ674R7 924 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 NOXRED1Q6NXP6 359 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 DNAJC14Q6Y2X3 702 aaPredicted RBP16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 ERN2Q76MJ5 926 aaKnown RBP16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 DSG4Q86SJ6 1040 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 TRIM74Q86UV6 250 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 CPA6Q8N4T0 437 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 CBR4Q8N4T8 237 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 SUSD6Q92537 303 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 FOXJ1Q92949 421 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 ZNF514Q96K75 400 aaPredicted RBP16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 APOLD1Q96LR9 279 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 HHIPQ96QV1 700 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 YIPF3Q9GZM5 350 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 OR2AG1Q9H205 316 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 GORASP2Q9H8Y8 452 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 GPRC5BQ9NZH0 403 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 PPT2Q9UMR5 302 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 PCDHGB4Q9UN71 923 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 PCDHGB5Q9Y5G0 923 aa16.1■□□□□ 0.17
PIKFYVE-204ENST00000407449 K7ESM1 405 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 PLK4O00444 970 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 GSTA4O15217 222 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 MAP3K13O43283 966 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 PRMT3O60678 531 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 C1orf105O95561 183 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 SLC16A8O95907 504 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 LDLRP01130 860 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 C7P10643 843 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 PHC1P78364 1004 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 NHSL2Q5HYW2 709 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 TRAPPC5Q8IUR0 188 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 SFTPA1Q8IWL2 248 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 RIMKLAQ8IXN7 391 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 TMEM132CQ8N3T6 1108 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 DNAJC5GQ8N7S2 189 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 METTL2AQ96IZ6 378 aaKnown RBP16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 LINC00615Q96LM1 132 aaPredicted RBP16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 OR4K3Q96R72 315 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 CPPED1Q9BRF8 314 aaPredicted RBP16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 MRPS26Q9BYN8 205 aaKnown RBP16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 ANKRD60Q9BZ19 345 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 LMAN2LQ9H0V9 348 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 SERHLQ9NQF3 203 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 SPATA6Q9NWH7 488 aaPredicted RBP16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 GULP1Q9UBP9 304 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 VPS29Q9UBQ0 182 aa16.09■□□□□ 0.17
PIKFYVE-204ENST00000407449 FAM220BPB1ANY3 271 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 RASAL1O95294 804 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 HOXB9P17482 250 aaPredicted RBP16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 OPRD1P41143 372 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 PNLIPRP1P54315 467 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 DPY19L1Q2PZI1 675 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 C9orf50Q5SZB4 431 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 OR10A6Q8NH74 314 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 CXorf40AQ8TE69 158 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 SEPHS2Q99611 448 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 CHID1Q9BWS9 393 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 HDAC8Q9BY41 377 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 IKZF5Q9H5V7 419 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 CERS4Q9HA82 394 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 BRF2Q9HAW0 419 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 TRIM39Q9HCM9 518 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 OAZ3Q9UMX2 235 aa16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 RUVBL1Q9Y265 456 aaKnown RBP16.08■□□□□ 0.17
PIKFYVE-204ENST00000407449 CROCCQ5TZA2 2017 aa16.08■□□□□ 0.16
PIKFYVE-204ENST00000407449 ELOVL7A1L3X0 281 aa16.08■□□□□ 0.16
PIKFYVE-204ENST00000407449 TBC1D3BA6NDS4 549 aa16.08■□□□□ 0.16
PIKFYVE-204ENST00000407449 VEGFDO43915 354 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms