RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SERHLQ9NQF3 203 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ASIC5Q9NY37 505 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 UPK3BL1B0FP48 263 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 UPK3BL2E5RIL1 263 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 G3V2T6 193 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 GRM6O15303 877 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NOBOXO60393 691 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 C1QCP02747 245 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CDKN2CP42773 168 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CAMK2BQ13554 666 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ATP1A4Q13733 1029 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 C16orf87Q6PH81 154 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 AADATQ8N5Z0 425 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ADAMTS16Q8TE57 1224 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CPEB1Q9BZB8 566 aaKnown RBP17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PPT2Q9UMR5 302 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TRBV5-3A0A0A0MS03 114 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ABHD14A-ACY1A0A1B0GW23 586 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CDH3P22223 829 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SHMT2P34897 504 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ARPC4P59998 168 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ZBED5Q49AG3 693 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 STARD8Q92502 1023 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ISOC1Q96CN7 298 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 APOLD1Q96LR9 279 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TOX2Q96NM4 488 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 BBS2Q9BXC9 721 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 POLR1BQ9H9Y6 1135 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PKD2L2Q9NZM6 624 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 C5orf42Q9H799 3197 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 KCNE1BA0A087WTH5 132 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 OR2AG2A6NM03 316 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 THRBP10828 461 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 MYCLP1P12525 358 aaPredicted RBP17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SDC1P18827 310 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 S100A3P33764 101 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 VEGFBP49765 207 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CLDN8P56748 225 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NUP107P57740 925 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 LRRC70Q7Z2Q7 622 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 MICU2Q8IYU8 434 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CENPSQ8N2Z9 138 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 KREMEN2Q8NCW0 462 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NETO1Q8TDF5 533 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SORCS1Q8WY21 1168 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SH3GL1Q99961 368 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 LINC00597Q9H2U6 94 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ASAH2Q9NR71 780 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 GPRC5BQ9NZH0 403 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SNX6Q9UNH7 406 aa17.84■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TMX2-CTNND1H3BSU7 103 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 GNGT2O14610 69 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NUAK1O60285 661 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CXCL14O95715 111 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 C8GP07360 202 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CTSAP10619 480 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 HTRA3P83110 453 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PON2Q15165 354 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NEDD8Q15843 81 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 Q6ZVL8 140 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 KCTD8Q6ZWB6 473 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 OR2A12Q8NGT7 310 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 EBPLQ9BY08 206 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CXorf21Q9HAI6 301 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ATAD3AQ9NVI7 634 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 IFT80Q9P2H3 777 aaPredicted RBP17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 KIAA1671Q9BY89 1806 aa17.83■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PABPN1LA6NDY0 278 aaKnown RBP17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 H0YAE9 185 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CREG1O75629 220 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PABPC1P11940 636 aaKnown RBP17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SLC6A12P48065 614 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 RAB15P59190 212 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 DMPKQ09013 629 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 GBX1Q14549 363 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 POM121L1PQ3SYA9 428 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 LILRA6Q6PI73 481 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 GDPD4Q6W3E5 623 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 HSD11B1LQ7Z5J1 315 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ELMOD1Q8N336 334 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 NAT16Q8N8M0 369 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 DDHD1Q8NEL9 900 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ELMO1Q92556 727 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 FOXJ1Q92949 421 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 C12orf43Q96C57 262 aaKnown RBP17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 FAM120BQ96EK7 910 aaKnown RBP17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ZNF641Q96N77 438 aaPredicted RBP17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 DCUN1D5Q9BTE7 237 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TOR3AQ9H497 397 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 MTG2Q9H4K7 406 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 DNAJB9Q9UBS3 223 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 NOX1Q9Y5S8 564 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 U3KQV3 271 aa17.83■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TMEM202A6NGA9 273 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SERPINA1P01009 418 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PRKACGP22612 351 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 EEF1B2P24534 225 aaKnown RBP17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SLC14A1Q13336 389 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 RAB39AQ14964 217 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CCNYL2Q5T2Q4 361 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms