RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 MFSD14CQ5VZR4 134 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 PNCKQ6P2M8 343 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 HACD2Q6Y1H2 254 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SYTL1Q8IYJ3 562 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ZNF683Q8IZ20 524 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 CARNMT1Q8N4J0 409 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LINC00469Q8N7U9 141 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 FBXO30Q8TB52 745 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LINC01599Q8WXQ3 324 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SGCDQ92629 289 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 GTF2H4Q92759 462 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SNAPC3Q92966 411 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ITCHQ96J02 903 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ST6GAL2Q96JF0 529 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 C1orf74Q96LT6 269 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TRPM7Q96QT4 1865 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 EGFL8Q99944 293 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 AARSD1Q9BTE6 412 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 TRIM62Q9BVG3 475 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 C1QTNF7Q9BXJ2 289 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 MMP27Q9H306 513 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LIN7BQ9HAP6 207 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 MRM3Q9HC36 420 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 TIGARQ9NQ88 270 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 PAK1IP1Q9NWT1 392 aaPredicted RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 ATP6V1HQ9UI12 483 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 AP3M1Q9Y2T2 418 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 A0A0X1KG70 313 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 MTMR11A4FU01 709 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 C2orf78A6NCI8 922 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 AGAP5A6NIR3 686 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 C2orf81A6NN90 581 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 A8MV72 311 aaPredicted RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 H3BUI4 141 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 TRIM77I1YAP6 450 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 SLC9A3R1O14745 358 aaPredicted RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 STX7O15400 261 aaKnown RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 SEPT4O43236 478 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 ADAMTS4O75173 837 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 KLKB1P03952 638 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 TRAPPC2P0DI81 140 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 TRAPPC2BP0DI82 140 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 IL7P13232 177 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 IL7RP16871 459 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 ATF6P18850 670 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 CYP2A7P20853 494 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 GTF2E2P29084 291 aaKnown RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 OR1D2P34982 312 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 RFC2P35250 354 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 HSPA7P48741 367 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 PRIM2P49643 509 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 TRAF3Q13114 568 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 NR6A1Q15406 480 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 RFTN2Q52LD8 501 aaPredicted RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 RNF219Q5W0B1 726 aaPredicted RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 TTC23Q5W5X9 447 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 LETMD1Q6P1Q0 360 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 PRMT9Q6P2P2 845 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 SLC24A5Q71RS6 500 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 ZNF767PQ75MW2 155 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 SPATC1Q76KD6 591 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 ANKRD46Q86W74 232 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 RASAL3Q86YV0 1011 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 LURAP1LQ8IV03 231 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 TBC1D21Q8IYX1 336 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 ADGRG5Q8IZF4 528 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 FAM86B1Q8N7N1 296 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 ANKRD53Q8N9V6 530 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 FAM83FQ8NEG4 500 aaPredicted RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 DBF4BQ8NFT6 615 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 LHFPL5Q8TAF8 219 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 RELTQ969Z4 430 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 L3HYPDHQ96EM0 354 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 CCDC120Q96HB5 630 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 MIR1-1HGQ9H1L0 117 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 NSUN3Q9H649 340 aaKnown RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 COMMD8Q9NX08 183 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 TNFRSF10DQ9UBN6 386 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 AASSQ9UDR5 926 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 TRMT6Q9UJA5 497 aaKnown RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 ABT1Q9ULW3 272 aaKnown RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 PCDHB8Q9UN66 801 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 POLR3HQ9Y535 204 aaPredicted RBP4.9□□□□□ -1.62
SSR1-202ENST00000397511 RAI2Q9Y5P3 530 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 NLRC5Q86WI3 1866 aa4.9□□□□□ -1.62
SSR1-202ENST00000397511 INSIG1O15503 277 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 PRAMEF11O60813 436 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 CPNE3O75131 537 aaKnown RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 SLC22A3O75751 556 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 SLITRK5O94991 958 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 MED26O95402 600 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 FGF1P05230 155 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 RHOCP08134 193 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 PRKACGP22612 351 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 HOXD9P28356 352 aaPredicted RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 CORO1AP31146 461 aaKnown RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 UQCRC1P31930 480 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 GNALP38405 381 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 SLC26A3P40879 764 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms