RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 BLKP51451 505 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 CLCNKAP51800 687 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 NAA20P61599 178 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 HNRNPKP61978 463 aaKnown RBP eCLIP12.85□□□□□ -0.35
SEC13-209ENST00000397117 CDKL1Q00532 357 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 RCN2Q14257 317 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 FZD2Q14332 565 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 SETDB1Q15047 1291 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 ZNF678Q5SXM1 525 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 TTC23LQ6PF05 361 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 XKR5Q6UX68 686 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 UNC5DQ6UXZ4 953 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 PARGQ86W56 976 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 CRLF3Q8IUI8 442 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 TCAIMQ8N3R3 496 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 OR6Y1Q8NGX8 325 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 MAPK15Q8TD08 544 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 MAGEC3Q8TD91 643 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 GRAMD1AQ96CP6 724 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 CNDP1Q96KN2 507 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 C7orf26Q96N11 449 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 CCT8L2Q96SF2 557 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 DRC3Q9H069 523 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 WWP1Q9H0M0 922 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 EML4Q9HC35 981 aaKnown RBP12.85□□□□□ -0.35
SEC13-209ENST00000397117 ACSS2Q9NR19 701 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 EVA1BQ9NVM1 165 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 TRNAU1APQ9NX07 287 aaKnown RBP12.85□□□□□ -0.35
SEC13-209ENST00000397117 DNAJC28Q9NX36 388 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 WWOXQ9NZC7 414 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 SATB2Q9UPW6 733 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 ASF1AQ9Y294 204 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 CSNK1G3Q9Y6M4 447 aa12.85□□□□□ -0.35
SEC13-209ENST00000397117 PDZK1P1A8MUH7 402 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 ARHGEF33A8MVX0 844 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 K7ENP7 123 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 LYPLA1O75608 230 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 SNUPNO95149 360 aaKnown RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 SIX3O95343 332 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 C1orf105O95561 183 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 FAM107AO95990 144 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 CSF2P04141 144 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 DRD4P21917 467 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 ACADLP28330 430 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 BDKRB1P46663 353 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 HNMTP50135 292 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 CTBSQ01459 385 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 OCRLQ01968 901 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 ILF3Q12906 894 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■■□□ 15.7
SEC13-209ENST00000397117 CES4AQ5XG92 561 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 ANKS6Q68DC2 871 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 ZCCHC8Q6NZY4 707 aaKnown RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 INO80CQ6PI98 192 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 ZNF548Q8NEK5 533 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 BCAS4Q8TDM0 211 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 TFGQ92734 400 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 MED8Q96G25 268 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 CCDC138Q96M89 665 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 TRMOQ9BU70 441 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 TMEM168Q9H0V1 697 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 CLMPQ9H6B4 373 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 NDUFAB1O14561 156 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 ITM2AO43736 263 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 CTSEP14091 401 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 NME1P15531 152 aaKnown RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 RBMS1P29558 406 aaKnown RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 ACTR1BP42025 376 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 HALP42357 657 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 AGTR2P50052 363 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 ACTR1AP61163 376 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 EIF2B5Q13144 721 aaKnown RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 KRT33BQ14525 404 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 TCEA2Q15560 299 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 UNC50Q53HI1 259 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 FBXO48Q5FWF7 155 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 ARL13AQ5H913 290 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 C3orf38Q5JPI3 329 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 SLC30A9Q6PML9 568 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 MBOAT1Q6ZNC8 495 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 FRMD7Q6ZUT3 714 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 RASGRP3Q8IV61 690 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 FBXO15Q8NCQ5 510 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 ATL1Q8WXF7 558 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 RHBDF1Q96CC6 855 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 MOCOSQ96EN8 888 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 RMDN2Q96LZ7 410 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 ILKAPQ9H0C8 392 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 TRIT1Q9H3H1 467 aaKnown RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 ZNF395Q9H8N7 513 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 KLF15Q9UIH9 416 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 PTBP2Q9UKA9 531 aaKnown RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 PNMA8BQ9ULN7 279 aaPredicted RBP12.84□□□□□ -0.35
SEC13-209ENST00000397117 PCDHGA8Q9Y5G5 932 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 ENTPD2Q9Y5L3 495 aa12.84□□□□□ -0.35
SEC13-209ENST00000397117 AHCTF1Q8WYP5 2266 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 CPED1A4D0V7 1026 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 EME2A4GXA9 379 aaPredicted RBP12.83□□□□□ -0.36
SEC13-209ENST00000397117 LRRC14BA6NHZ5 514 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 CDRT15L2A8MXV6 281 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms