RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 ITPKAP23677 461 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 CDKN2CP42773 168 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 HUNKP57058 714 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 VLDLRP98155 873 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 GALNT1Q10472 559 aaPredicted RBP9.97□□□□□ -0.81
FGFR1-209ENST00000397113 ST3GAL4Q11206 333 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 SCAPQ12770 1279 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 BCL2A1Q16548 175 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 PIK3R6Q5UE93 754 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 ZNF544Q6NX49 715 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 RGL4Q8IZJ4 473 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 ELMOD1Q8N336 334 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 MINDY2Q8NBR6 621 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 ZNF548Q8NEK5 533 aaPredicted RBP9.97□□□□□ -0.81
FGFR1-209ENST00000397113 ZNF675Q8TD23 568 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 KCTD13Q8WZ19 329 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 SLC38A4Q969I6 547 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 EFHD2Q96C19 240 aaPredicted RBP9.97□□□□□ -0.81
FGFR1-209ENST00000397113 CDCA5Q96FF9 252 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 MOV10Q9HCE1 1003 aaKnown RBP9.97□□□□□ -0.81
FGFR1-209ENST00000397113 ABCC13Q9NSE7 274 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 GPRC5BQ9NZH0 403 aa9.97□□□□□ -0.81
FGFR1-209ENST00000397113 CCDC182A6NF36 153 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 HOXC11O43248 304 aaPredicted RBP9.96□□□□□ -0.81
FGFR1-209ENST00000397113 PSIP1O75475 530 aaKnown RBP9.96□□□□□ -0.81
FGFR1-209ENST00000397113 SCO1O75880 301 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 STAU1O95793 577 aaKnown RBP9.96□□□□□ -0.81
FGFR1-209ENST00000397113 SLC25A27O95847 323 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 SMPD1P17405 629 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 WARSP23381 471 aaKnown RBP9.96□□□□□ -0.81
FGFR1-209ENST00000397113 RRM2P31350 389 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 FEN1P39748 380 aaKnown RBP9.96□□□□□ -0.81
FGFR1-209ENST00000397113 HSPA14Q0VDF9 509 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 CAMK2GQ13555 558 aaPredicted RBP9.96□□□□□ -0.81
FGFR1-209ENST00000397113 USP39Q53GS9 565 aaKnown RBP9.96□□□□□ -0.81
FGFR1-209ENST00000397113 INO80DQ53TQ3 878 aaPredicted RBP9.96□□□□□ -0.81
FGFR1-209ENST00000397113 PYDC2Q56P42 97 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 DGKKQ5KSL6 1271 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 PM20D1Q6GTS8 502 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 FBXL22Q6P050 247 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 KLHL17Q6TDP4 642 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 NKAPQ8N5F7 415 aaKnown RBP9.96□□□□□ -0.81
FGFR1-209ENST00000397113 ENKURQ8TC29 256 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 GTF2H4Q92759 462 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 SLX1AQ9BQ83 275 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 CLPBQ9H078 707 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 ATG10Q9H0Y0 220 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 TMEM161AQ9NX61 479 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 SLC25A37Q9NYZ2 338 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 SPEF1Q9Y4P9 236 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 KNL1Q8NG31 2342 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 TRAV19A0A0A6YYK7 116 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 SAGE2PA6NJ88 616 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 C12orf71A8MTZ7 269 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 H3BN98 237 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 WWP2O00308 870 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 AP2A2O94973 939 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 CCNYL3P0C7X3 344 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 SDHBP21912 280 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 TACR1P25103 407 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 CRATP43155 626 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 SPIBQ01892 262 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 RFX4Q33E94 735 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 AGAP6Q5VW22 663 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 PGBD5Q8N414 524 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 KBTBD8Q8NFY9 601 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 HSH2DQ96JZ2 352 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 AGAP4Q96P64 663 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 ZNF300Q96RE9 604 aaPredicted RBP9.96□□□□□ -0.81
FGFR1-209ENST00000397113 MMP27Q9H306 513 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 SP140LQ9H930 580 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 ZNF556Q9HAH1 456 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 MAT2BQ9NZL9 334 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 GTF2IRD1Q9UHL9 959 aa9.96□□□□□ -0.81
FGFR1-209ENST00000397113 LCHNA4D1U4 455 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 FFAR2O15552 330 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 SCELO95171 688 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 SOX14O95416 240 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 OTCP00480 354 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 GBAP04062 536 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 EIF2S1P05198 315 aaKnown RBP9.96□□□□□ -0.82
FGFR1-209ENST00000397113 AIF1P55008 147 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 SLC35A2P78381 396 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 CSTF3Q12996 717 aaKnown RBP9.96□□□□□ -0.82
FGFR1-209ENST00000397113 MFSD14CQ5VZR4 134 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 CYP4Z2PQ8N1L4 340 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 THEM5Q8N1Q8 247 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 BRSK1Q8TDC3 778 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 PPP3R2Q96LZ3 170 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 MTERF1Q99551 399 aaKnown RBP9.96□□□□□ -0.82
FGFR1-209ENST00000397113 ZNF717Q9BY31 904 aaPredicted RBP9.96□□□□□ -0.82
FGFR1-209ENST00000397113 C11orf16Q9NQ32 467 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 ARL15Q9NXU5 204 aa9.96□□□□□ -0.82
FGFR1-209ENST00000397113 PTHP01270 115 aa9.95□□□□□ -0.82
FGFR1-209ENST00000397113 ALPIP09923 528 aa9.95□□□□□ -0.82
FGFR1-209ENST00000397113 HLA-DPA1P20036 260 aa9.95□□□□□ -0.82
FGFR1-209ENST00000397113 GRK5P34947 590 aa9.95□□□□□ -0.82
FGFR1-209ENST00000397113 SOX3P41225 446 aa9.95□□□□□ -0.82
FGFR1-209ENST00000397113 RPS24P62847 133 aaKnown RBP9.95□□□□□ -0.82
FGFR1-209ENST00000397113 NPRL3Q12980 569 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms