RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 ZNF658BQ4V348 819 aaPredicted RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 BCL7AQ4VC05 210 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 TEDDM1Q5T9Z0 273 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 GRTP1Q5TC63 336 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 ZNF470Q6ECI4 717 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 KLHL35Q6PF15 583 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 ADGRD1Q6QNK2 874 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 KIAA0408Q6ZU52 694 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 MTERF4Q7Z6M4 381 aaKnown RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 STRA8Q7Z7C7 330 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 SYVN1Q86TM6 617 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 OOSP2Q86WS3 158 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 KMT5CQ86Y97 462 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 TMEM126BQ8IUX1 230 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 CNTN4Q8IWV2 1026 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 ENDOVQ8N8Q3 282 aaKnown RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 PHC3Q8NDX5 983 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 PGM2Q96G03 612 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 LINC00615Q96LM1 132 aaPredicted RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 CD180Q99467 661 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 SH3GL2Q99962 352 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 DHRS4Q9BTZ2 278 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 GPR87Q9BY21 358 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 ING2Q9H160 280 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 CATSPERZQ9NTU4 200 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 IL1RAPL1Q9NZN1 696 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 LUZP4Q9P127 313 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 TBK1Q9UHD2 729 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 ACSL5Q9ULC5 683 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 BTRCQ9Y297 605 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 VPS9D1Q9Y2B5 631 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 CCDC88CQ9P219 2028 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 TTLL8A6PVC2 850 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 MEN1O00255 615 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 PIAS1O75925 651 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 SORBS2O94875 1100 aaKnown RBP9.99□□□□□ -0.81
NEDD8-202ENST00000396828 C1QAP02745 245 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 CTSBP07858 339 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 ST6GAL1P15907 406 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 KRT15P19012 456 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 ITGALP20701 1170 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 PRDX3P30048 256 aaKnown RBP9.99□□□□□ -0.81
NEDD8-202ENST00000396828 SPRP35270 261 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-202ENST00000396828 GP5P40197 560 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 CSE1LP55060 971 aaKnown RBP9.99□□□□□ -0.81
NEDD8-202ENST00000396828 ITGA1P56199 1179 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 FOXL2P58012 376 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 RPS15P62841 145 aaKnown RBP9.99□□□□□ -0.81
NEDD8-202ENST00000396828 CACNG1Q06432 222 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 TMED2Q15363 201 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 PTCHD3Q3KNS1 767 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 ZRANB3Q5FWF4 1079 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 RNF187Q5TA31 235 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-202ENST00000396828 LYPLAL1Q5VWZ2 237 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 FAM198BQ6UWH4 519 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 PACS1Q6VY07 963 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 BPHLQ86WA6 291 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-202ENST00000396828 CILP2Q8IUL8 1156 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 DSELQ8IZU8 1212 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 NXPE1Q8N323 547 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 CLDN19Q8N6F1 224 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 Q8NA96 180 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 C2CD4AQ8NCU7 369 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-202ENST00000396828 FDCSPQ8NFU4 85 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 CPT1CQ8TCG5 803 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 DCAKDQ8WVC6 231 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 THAP4Q8WY91 577 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 ZBTB9Q96C00 473 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 MTBPQ96DY7 904 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 TCF12Q99081 682 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 SLC25A23Q9BV35 468 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 OR52A5Q9H2C5 316 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 XKR8Q9H6D3 395 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 TMBIM4Q9HC24 238 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 SMYD2Q9NRG4 433 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 PCMTD2Q9NV79 361 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 SOHLH2Q9NX45 425 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 LGALS13Q9UHV8 139 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 FBXO5Q9UKT4 447 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 POMT2Q9UKY4 750 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 CSMD1Q96PZ7 3565 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 SEC16AO15027 2179 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 NOTCH2Q04721 2471 aa9.99□□□□□ -0.81
NEDD8-202ENST00000396828 OR51F1A6NGY5 319 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 A6NL46 340 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 HMGB1P1B2RPK0 211 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-202ENST00000396828 TMEM150CB9EJG8 249 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 MASP2O00187 686 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 BTN3A1O00481 513 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 SEMA7AO75326 666 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 NDUFS3O75489 264 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 SNRPAP09012 282 aaKnown RBP9.98□□□□□ -0.81
NEDD8-202ENST00000396828 SLC35G4P0C7Q5 338 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 TPBGLP0DKB5 382 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 ATP1B2P14415 290 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-202ENST00000396828 CDH3P22223 829 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 GCAP28676 217 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 SLC1A2P43004 574 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 PREPP48147 710 aa9.98□□□□□ -0.81
NEDD8-202ENST00000396828 TTPAP49638 278 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms