RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 SLC22A11Q9NSA0 550 aa15.64■□□□□ 0.09
CLTA-203ENST00000396603 ERRFI1Q9UJM3 462 aaPredicted RBP15.64■□□□□ 0.09
CLTA-203ENST00000396603 ANAPC5Q9UJX4 755 aa15.64■□□□□ 0.09
CLTA-203ENST00000396603 PIKFYVEQ9Y2I7 2098 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.63■□□□□ 0.09
CLTA-203ENST00000396603 RASGRF2O14827 1237 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 OR1I1O60431 355 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 RNF224P0DH78 156 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 TTPAP49638 278 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 PRAMEP78395 509 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 CKAP4Q07065 602 aaKnown RBP15.63■□□□□ 0.09
CLTA-203ENST00000396603 HSPA14Q0VDF9 509 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 GRB7Q14451 532 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 NKG7Q16617 165 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 TTLL10Q6ZVT0 673 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 ZNF534Q76KX8 674 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 LRRC6Q86X45 466 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 CISD2Q8N5K1 135 aaKnown RBP15.63■□□□□ 0.09
CLTA-203ENST00000396603 TTC29Q8NA56 475 aaPredicted RBP15.63■□□□□ 0.09
CLTA-203ENST00000396603 RAD51AP1Q96B01 352 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 SPSB2Q99619 263 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 SEMA3GQ9NS98 782 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 TCAF1Q9Y4C2 921 aa15.63■□□□□ 0.09
CLTA-203ENST00000396603 PRMT5O14744 637 aaPredicted RBP15.62■□□□□ 0.09
CLTA-203ENST00000396603 CTSBP07858 339 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 ZSCAN5DPP0CG00 497 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 ETS1P14921 441 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 ALAS2P22557 587 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 AOAHP28039 575 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 CCNFP41002 786 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 TSFMP43897 325 aaKnown RBP15.62■□□□□ 0.09
CLTA-203ENST00000396603 GPS1Q13098 491 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 SLC9A5Q14940 896 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 CCDC38Q502W7 563 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 AGAP7PQ5VUJ5 663 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 TTC27Q6P3X3 843 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 CUZD1Q86UP6 607 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 TAB3Q8N5C8 712 aaPredicted RBP15.62■□□□□ 0.09
CLTA-203ENST00000396603 LMNTD1Q8N9Z9 388 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 OR6P1Q8NGX9 317 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 MAGEC3Q8TD91 643 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 INPP5DQ92835 1189 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 SLCO2A1Q92959 643 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 AGAP4Q96P64 663 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 SLC6A20Q9NP91 592 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 CUTCQ9NTM9 273 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 PIH1D1Q9NWS0 290 aaKnown RBP15.62■□□□□ 0.09
CLTA-203ENST00000396603 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.62■□□□□ 0.09
CLTA-203ENST00000396603 PCYOX1Q9UHG3 505 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 CDC23Q9UJX2 597 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 FBXL4Q9UKA2 621 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 SLC39A10Q9ULF5 831 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 PLAGL1Q9UM63 463 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 FER1L5A0AVI2 2057 aa15.62■□□□□ 0.09
CLTA-203ENST00000396603 NOTCH2Q04721 2471 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 VSTM2BA6NLU5 285 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 SOCS6O14544 535 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 NDC80O14777 642 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 PRICKLE3O43900 615 aaPredicted RBP15.61■□□□□ 0.09
CLTA-203ENST00000396603 TPSB2P20231 275 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 RPS3P23396 243 aaKnown RBP eCLIP15.61■□□□□ 0.092e-12■■□□□ 14.5
CLTA-203ENST00000396603 ITGA3P26006 1051 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 CARSP49589 748 aaKnown RBP15.61■□□□□ 0.09
CLTA-203ENST00000396603 SF1Q15637 639 aaKnown RBP15.61■□□□□ 0.09
CLTA-203ENST00000396603 TPSAB1Q15661 275 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 TUBB8Q3ZCM7 444 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 ARMC3Q5W041 872 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 FCRL6Q6DN72 434 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 PRMT9Q6P2P2 845 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 FIGLAQ6QHK4 219 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 NAPRTQ6XQN6 538 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 VRK3Q8IV63 474 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 PPHLN1Q8NEY8 458 aaKnown RBP15.61■□□□□ 0.09
CLTA-203ENST00000396603 GSDMBQ8TAX9 411 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 SELENOSQ9BQE4 189 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 LHPPQ9H008 270 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 EPS8L2Q9H6S3 715 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 CATSPERZQ9NTU4 200 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 GNPTGQ9UJJ9 305 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 HS3ST3B1Q9Y662 390 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 FAM169AQ9Y6X4 670 aa15.61■□□□□ 0.09
CLTA-203ENST00000396603 PCDH17O14917 1159 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 GLRBP48167 497 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 VPS41P49754 854 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 EMP3P54852 163 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 DR1Q01658 176 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 DHX34Q14147 1143 aaKnown RBP15.6■□□□□ 0.09
CLTA-203ENST00000396603 PCID2Q5JVF3 399 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 RPUSD3Q6P087 351 aaKnown RBP15.6■□□□□ 0.09
CLTA-203ENST00000396603 KIRREL2Q6UWL6 708 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 MICALCLQ6ZW33 695 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 COX15Q7KZN9 410 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 PCGF5Q86SE9 256 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 SLC34A3Q8N130 599 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 DDX47Q9H0S4 455 aaKnown RBP15.6■□□□□ 0.09
CLTA-203ENST00000396603 P2RY12Q9H244 342 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 BFARQ9NZS9 450 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 SPATA7Q9P0W8 599 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 SLC2A6Q9UGQ3 507 aa15.6■□□□□ 0.09
CLTA-203ENST00000396603 ASIC3Q9UHC3 531 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms