RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 NIF3L1Q9GZT8 377 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 POMKQ9H5K3 350 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SARS2Q9NP81 518 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 SLC22A11Q9NSA0 550 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 RNF19AQ9NV58 838 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 GIMAP2Q9UG22 337 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 IKZF3Q9UKT9 509 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 CA5BQ9Y2D0 317 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 LYVE1Q9Y5Y7 322 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 MRPL42Q9Y6G3 142 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 A0A1W2PQ09 198 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 TSPAN3O60637 253 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ZNF14P17017 642 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 NUDT1P36639 197 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ARCN1P48444 511 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 BEX3Q00994 111 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SELPLGQ14242 412 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 DUSP6Q16828 381 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 TATDN3Q17R31 274 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 HSDL1Q3SXM5 330 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SOWAHCQ53LP3 525 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 SH3PXD2AQ5TCZ1 1133 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ZNF470Q6ECI4 717 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 GLRX5Q86SX6 157 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SYVN1Q86TM6 617 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 LACC1Q8IV20 430 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 TMEM102Q8N9M5 508 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 OR6B3Q8NGW1 331 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 OR6F1Q8NGZ6 308 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 LHFPL5Q8TAF8 219 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 KLHL6Q8WZ60 621 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 C11orf24Q96F05 449 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 TPD52L3Q96J77 140 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 UHRF1Q96T88 793 aaPredicted RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 MYOCQ99972 504 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 DPEP3Q9H4B8 488 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 MINDY3Q9H8M7 445 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SSU72Q9NP77 194 aaKnown RBP8.23□□□□□ -1.09
NDE1-202ENST00000396355 FLRT1Q9NZU1 646 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 VTI1BQ9UEU0 232 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SLC23A1Q9UHI7 598 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 ACOT9Q9Y305 439 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 PCDHGA6Q9Y5G7 932 aa8.23□□□□□ -1.09
NDE1-202ENST00000396355 SOWAHBA6NEL2 793 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 NEMP2A6NFY4 417 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 LINC00587B1AMM8 73 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 SMAD9O15198 467 aaKnown RBP8.22□□□□□ -1.09
NDE1-202ENST00000396355 MAFO75444 373 aaPredicted RBP8.22□□□□□ -1.09
NDE1-202ENST00000396355 ALDH1A2O94788 518 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 LSM8O95777 96 aaKnown RBP8.22□□□□□ -1.09
NDE1-202ENST00000396355 LTFP02788 710 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 CSF2RAP15509 400 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 PDGFRAP16234 1089 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 TGFBR2P37173 567 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 ARL4AP40617 200 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 NKX3-2P78367 333 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 HYAL4Q2M3T9 481 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 MAJINQ3KP22 176 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 LHX8Q68G74 356 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 NAPEPLDQ6IQ20 393 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 TRNP1Q6NT89 227 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 GPR153Q6NV75 609 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 LBX2Q6XYB7 198 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 TMEM151BQ8IW70 566 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 C12orf45Q8N5I9 185 aaPredicted RBP8.22□□□□□ -1.09
NDE1-202ENST00000396355 AKR7LQ8NHP1 331 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 RDH11Q8TC12 318 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 ARNTL2Q8WYA1 636 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 MNTQ99583 582 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 APOL5Q9BWW9 433 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 ZNF556Q9HAH1 456 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 FBRSL1Q9HCM7 1045 aaKnown RBP8.22□□□□□ -1.09
NDE1-202ENST00000396355 PRDM9Q9NQV7 894 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 SIX4Q9UIU6 781 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 ACSL5Q9ULC5 683 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 DRG1Q9Y295 367 aaKnown RBP8.22□□□□□ -1.09
NDE1-202ENST00000396355 DOCK3Q8IZD9 2030 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 LOC105369274A0A096LPK9 316 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 PRSS51A0A1B0GVH4 220 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 SLCO1B7G3V0H7 640 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 L7N2F9 121 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 DIRAS1O95057 198 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 PRAMEF1O95521 474 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 MBP02144 154 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 SLC2A3P11169 496 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 IMPDH1P20839 514 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 GADD45AP24522 165 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 POLR2IP36954 125 aaKnown RBP8.22□□□□□ -1.09
NDE1-202ENST00000396355 CASP6P55212 293 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 CD47Q08722 323 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 CHAF1BQ13112 559 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 ZNF235Q14590 738 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 SEC23BQ15437 767 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 RAB30Q15771 203 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 FAM189A2Q15884 450 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 RBBP7Q16576 425 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 TIMM50Q3ZCQ8 353 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 EEF1DP3Q658K8 133 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 TMEM81Q6P7N7 255 aa8.22□□□□□ -1.09
NDE1-202ENST00000396355 ALKAL2Q6UX46 152 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms