RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 GPLD1P80108 840 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 HHEXQ03014 270 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 ABRQ12979 859 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 STX3Q13277 289 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 E2F2Q14209 437 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 KRT33BQ14525 404 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 CLCA4Q14CN2 919 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 CHI3L2Q15782 390 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 SEPT7Q16181 437 aaKnown RBP8.21□□□□□ -1.1
HERC4-203ENST00000395185 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.21□□□□□ -1.1
HERC4-203ENST00000395185 ZNF678Q5SXM1 525 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 TTC19Q6DKK2 380 aaPredicted RBP8.21□□□□□ -1.1
HERC4-203ENST00000395185 LRRC69Q6ZNQ3 347 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 USP53Q70EK8 1073 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 UBE2R2Q712K3 238 aaPredicted RBP8.21□□□□□ -1.1
HERC4-203ENST00000395185 PIGWQ7Z7B1 504 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 C17orf82Q86X59 251 aaPredicted RBP8.21□□□□□ -1.1
HERC4-203ENST00000395185 MARCH9Q86YJ5 346 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 RBM12BQ8IXT5 1001 aaKnown RBP8.21□□□□□ -1.1
HERC4-203ENST00000395185 NAGSQ8N159 534 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 SFRP1Q8N474 314 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 FBXO39Q8N4B4 442 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 MCOLN3Q8TDD5 553 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 ZFPM2Q8WW38 1151 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 TFGQ92734 400 aaPredicted RBP8.21□□□□□ -1.1
HERC4-203ENST00000395185 FGF11Q92914 225 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 FBXL8Q96CD0 374 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 CXorf40BQ96DE9 158 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 CHMP6Q96FZ7 201 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 CNDP1Q96KN2 507 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 C7orf26Q96N11 449 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 ZNF578Q96N58 590 aaPredicted RBP8.21□□□□□ -1.1
HERC4-203ENST00000395185 CMKLR1Q99788 373 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 TRMOQ9BU70 441 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 EPN3Q9H201 632 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 EPB41L1Q9H4G0 881 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 GSTO2Q9H4Y5 243 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 ZNF395Q9H8N7 513 aaPredicted RBP8.21□□□□□ -1.1
HERC4-203ENST00000395185 POLR1BQ9H9Y6 1135 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 SLCO1B3Q9NPD5 702 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 PRDM8Q9NQV8 689 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 CPNE7Q9UBL6 633 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 TBC1D29Q9UFV1 150 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 ZMIZ1Q9ULJ6 1067 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 RNF112Q9ULX5 631 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 DNAJC16Q9Y2G8 782 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 ASB1Q9Y576 335 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 TNRC6BQ9UPQ9 1833 aaKnown RBP8.21□□□□□ -1.1
HERC4-203ENST00000395185 PCNX2A6NKB5 2137 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 CEP192Q8TEP8 1941 aa8.21□□□□□ -1.1
HERC4-203ENST00000395185 CCDC187A0A096LP49 1063 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 E2F3O00716 465 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 UBFD1O14562 309 aaKnown RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 ZNF195O14628 629 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 PPM1DO15297 605 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 B4GAT1O43505 415 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 ITM2AO43736 263 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 SMIM24O75264 130 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 TGDSO95455 350 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 EML2O95834 649 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 CATP04040 527 aaKnown RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 FGF4P08620 206 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 JMJD7P0C870 316 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 AMD1P17707 334 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 XRCC1P18887 633 aaPredicted RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 HNMTP50135 292 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 SEC24CP53992 1094 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 CLDN6P56747 220 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 ABCE1P61221 599 aaKnown RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 GABREP78334 506 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 ASPHQ12797 758 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 SQSTM1Q13501 440 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 ARHGAP19Q14CB8 494 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 RPE65Q16518 533 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 CYP2A13Q16696 494 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 PFKFB4Q16877 469 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 CCSMST1Q4G0I0 132 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 ARL13AQ5H913 290 aaPredicted RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 PHF19Q5T6S3 580 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 TMEM164Q5U3C3 297 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 ATG16L1Q676U5 607 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 KLHL35Q6PF15 583 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 FOXR1Q6PIV2 292 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 BRICD5Q6PL45 260 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 RAB11FIP2Q7L804 512 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 ZNF438Q7Z4V0 828 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 SPRED1Q7Z699 444 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 TBC1D21Q8IYX1 336 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 LRRC34Q8IZ02 419 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 TCAIMQ8N3R3 496 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 PTGR2Q8N8N7 351 aaPredicted RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 OR56A3Q8NH54 315 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 OR5K2Q8NHB8 316 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 HMGCLL1Q8TB92 370 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 SLC37A2Q8TED4 501 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 ZNF483Q8TF39 744 aaPredicted RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 THAP11Q96EK4 314 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 MOCOSQ96EN8 888 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 CCDC138Q96M89 665 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 TMEM237Q96Q45 408 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms