RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TREX1Q9NSU2 369 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 GNPTGQ9UJJ9 305 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 NOVA2Q9UNW9 492 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 ZNF148Q9UQR1 794 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 NTNG1Q9Y2I2 539 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 DOCK10Q96BY6 2186 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 CD3EAPO15446 510 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 C1orf105O95561 183 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 IFNB1P01574 187 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 SEL1L2Q5TEA6 688 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 PTRHD1Q6GMV3 140 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 RPUSD3Q6P087 351 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 C4orf22Q6V702 233 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 KCNMB4Q86W47 210 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 SLC13A5Q86YT5 568 aaPredicted RBP16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 TMEM151BQ8IW70 566 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 OR11G2Q8NGC1 345 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 CFAP61Q8NHU2 1237 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 IL17FQ96PD4 163 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 LMF1Q96S06 567 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 IL22Q9GZX6 179 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 EPS8L2Q9H6S3 715 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 CHRAC1Q9NRG0 131 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 FAM169AQ9Y6X4 670 aa16.73■□□□□ 0.27
SNRPA1-202ENST00000394082 IGLV3-12A0A075B6K2 115 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 A0A1W2PQ72 361 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 MASP2O00187 686 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 CTSVO60911 334 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 PHF2O75151 1096 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 EDN3P14138 238 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 ATP5DP30049 168 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 DCTP40126 519 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 ADARP55265 1226 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 ZNF169Q14929 603 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 TLR1Q15399 786 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 WASHC2DQ5SRD0 308 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 ARMC3Q5W041 872 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 DRICH1Q6PGQ1 229 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 RNF44Q7L0R7 432 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 OTOAQ7RTW8 1153 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 SLC34A3Q8N130 599 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 KRT222Q8N1A0 295 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 C2orf73Q8N5S3 287 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 CCDC89Q8N998 374 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 OR2L3Q8NG85 312 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 OR2A1Q8NGT9 310 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 DNAJB14Q8TBM8 379 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 FOPNLQ96NB1 174 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 SPATA7Q9P0W8 599 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 MARCH4Q9P2E8 410 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 CTSFQ9UBX1 484 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 TTC7AQ9ULT0 858 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 CAPN6Q9Y6Q1 641 aa16.72■□□□□ 0.27
SNRPA1-202ENST00000394082 LRBAP50851 2863 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 HYKKA2RU49 373 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 PCDH17O14917 1159 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 MATN4O95460 622 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 HPP00738 406 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 FDXRP22570 491 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 MCM3P25205 808 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 GBX1Q14549 363 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 RBBP7Q16576 425 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 HIF1AQ16665 826 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 ISLR2Q6UXK2 745 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 TICAM1Q8IUC6 712 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 FAR1Q8WVX9 515 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 MVB12AQ96EY5 273 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 TRIM56Q9BRZ2 755 aaKnown RBP16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 ZNF304Q9HCX3 659 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 ZNF282Q9UDV7 671 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 CSAG2Q9Y5P2 127 aa16.71■□□□□ 0.27
SNRPA1-202ENST00000394082 A0A1W2PPV9 198 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 OR2A25A4D2G3 310 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 H3BMM5 538 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 E2F3O00716 465 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 NDUFS3O75489 264 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 ERGP11308 486 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 OR1D4P47884 311 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 NPY2RP49146 381 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 PER3P56645 1201 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 VSX2P58304 361 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 CDK16Q00536 496 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 RELAQ04206 551 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 OCA2Q04671 838 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 MFAP5Q13361 173 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 CCNG2Q16589 344 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 MUM1Q2TAK8 710 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 RNF187Q5TA31 235 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 ATG9BQ674R7 924 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 LDB1Q86U70 411 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 TAX1BP1Q86VP1 789 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 STT3BQ8TCJ2 826 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 GRHL3Q8TE85 626 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 TCF12Q99081 682 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 CRB3Q9BUF7 120 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 SOX17Q9H6I2 414 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 DRG1Q9Y295 367 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 ZKSCAN5Q9Y2L8 839 aa16.7■□□□□ 0.26
SNRPA1-202ENST00000394082 CACNA1DQ01668 2161 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms