RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 NEURL1BA8MQ27 555 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 IQCF5A8MTL0 148 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 KIAA1324LA8MWY0 1029 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 FLRT2O43155 660 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 FMO6PO60774 539 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 AKR7A3O95154 331 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 MATN4O95460 622 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 CD63P08962 238 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 CD8BP10966 210 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 BCKDHAP12694 445 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 USF1P22415 310 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 CCR1P32246 355 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 GRIA2P42262 883 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 KCNC4Q03721 635 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ARHGAP1Q07960 439 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 PLA2G7Q13093 441 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 RIN1Q13671 783 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 TNFAIP1Q13829 316 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 HABP2Q14520 560 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 RAB39AQ14964 217 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 DUOXA2Q1HG44 320 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 PUS10Q3MIT2 529 aaKnown RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 C4orf17Q53FE4 359 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 PRAMEF13Q5VWM6 474 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 CCBE1Q6UXH8 406 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 ZNF571Q7Z3V5 609 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 GPR149Q86SP6 731 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 SLC22A15Q8IZD6 547 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ADGRF3Q8IZF5 1079 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 KLHL36Q8N4N3 616 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 FAM160A2Q8N612 972 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 COMMD1Q8N668 190 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 HJURPQ8NCD3 748 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 ZMIZ2Q8NF64 920 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 BEST4Q8NFU0 473 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 OR10R2Q8NGX6 335 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 BBS10Q8TAM1 723 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 STON2Q8WXE9 905 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 DNASE1L2Q92874 299 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 SECISBP2Q96T21 854 aaKnown RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 ATG5Q9H1Y0 275 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 MYNNQ9NPC7 610 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 HAO2Q9NYQ3 351 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 TAS2R1Q9NYW7 299 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 CPA4Q9UI42 421 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 PPM1HQ9ULR3 514 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 USP18Q9UMW8 372 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 MINPP1Q9UNW1 487 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 TIMM22Q9Y584 194 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 TNPO3Q9Y5L0 923 aaKnown RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 ARHGEF10O15013 1369 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 BLMP54132 1417 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 SLC9A3R1O14745 358 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 CHEK1O14757 476 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 SLITRK5O94991 958 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 KLF8O95600 359 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 CYP17A1P05093 508 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 PGCP20142 388 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 BMP6P22004 513 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ACVR2AP27037 513 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 CD34P28906 385 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 CD6P30203 668 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 GRPRP30550 384 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 SLC6A9P48067 706 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 CEBPDP49716 269 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 SULT1A2P50226 295 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 HLCSP50747 726 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 GBE1Q04446 702 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ST3GAL4Q11206 333 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 TARDBPQ13148 414 aaKnown RBP eCLIP3.2□□□□□ -1.9
PHF3-202ENST00000393387 SNTA1Q13424 505 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 LARS2Q15031 903 aaKnown RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 PTPAQ15257 358 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 DCST1Q5T197 706 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 TRAPPC3LQ5T215 181 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ATF7IP2Q5U623 682 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 DESI1Q6ICB0 168 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 KIAA0930Q6ICG6 404 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 SLC36A4Q6YBV0 504 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ARHGAP27Q6ZUM4 889 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 TMEM104Q8NE00 496 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 FAM46DQ8NEK8 389 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 NDNFQ8TB73 568 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 DTD1Q8TEA8 209 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ABHD5Q8WTS1 349 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ACOT11Q8WXI4 607 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 POP5Q969H6 163 aaKnown RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 ARL11Q969Q4 196 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 RHBDF1Q96CC6 855 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 MACROD1Q9BQ69 325 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 HTATIP2Q9BUP3 242 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 NXF2Q9GZY0 626 aaKnown RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 ADAM19Q9H013 955 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 TEX10Q9NXF1 929 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 PURGQ9UJV8 347 aaKnown RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 TRHDEQ9UKU6 1024 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 SSU72P8A0A1W2PR75 194 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 IRGMA1A4Y4 181 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 PPP1R3GB7ZBB8 358 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms