RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 RGS4P49798 205 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 EEFSECP57772 596 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 RPS7P62081 194 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 CALCOCO2Q13137 446 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 KNOP1Q1ED39 458 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 KRT79Q5XKE5 535 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 TMPRSS11FQ6ZWK6 438 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 SPRED1Q7Z699 444 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 CLEC10AQ8IUN9 316 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 UEVLDQ8IX04 471 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 DTX3Q8N9I9 347 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 OR52J3Q8NH60 311 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 CDC26Q8NHZ8 85 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 HMGCLL1Q8TB92 370 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 HDAC7Q8WUI4 952 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 CPA5Q8WXQ8 436 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 TADA1Q96BN2 335 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 PTCD3Q96EY7 689 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 TRMT61AQ96FX7 289 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 PGM2Q96G03 612 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 BTBD9Q96Q07 612 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 C1QTNF5Q9BXJ0 243 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ZNF160Q9HCG1 818 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.45□□□□□ -1.86
XRN1-202ENST00000392981 SPATA7Q9P0W8 599 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 IBTKQ9P2D0 1353 aaPredicted RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 TRIM49BA6NDI0 452 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 TRPC5OSA6NMA1 111 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ADRA2CP18825 462 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 CDC25AP30304 524 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 LIMS1P48059 325 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 MFAP3P55082 362 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ENPEPQ07075 957 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 MERTKQ12866 999 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 CDH18Q13634 790 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 BCL7AQ4VC05 210 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 BEX5Q5H9J7 111 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 PLCXD3Q63HM9 321 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 OR56A1Q8NGH5 318 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ANKRD7Q92527 254 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 PROX1Q92786 737 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 OR14A2Q96R54 314 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 NACC1Q96RE7 527 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 C17orf62Q9BQA9 187 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 FICDQ9BVA6 458 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 PRRG3Q9BZD7 231 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 SLC6A15Q9H2J7 730 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 RIMS4Q9H426 269 aaPredicted RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 C7orf69Q9H7B7 122 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 SLC2A8Q9NY64 477 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 GMPR2Q9P2T1 348 aaKnown RBP3.45□□□□□ -1.86
XRN1-202ENST00000392981 CAPN11Q9UMQ6 739 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ST3GAL5Q9UNP4 418 aa3.45□□□□□ -1.86
XRN1-202ENST00000392981 ABCA8O94911 1581 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 PRUNE2Q8WUY3 3088 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.44□□□□□ -1.86
XRN1-202ENST00000392981 GOLGA8IPA6NC78 632 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 MYADML2A6NDP7 307 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 ADM5C9JUS6 153 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 E7ENQ6 273 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 FOXN1O15353 648 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 FOXD2O60548 495 aaPredicted RBP3.44□□□□□ -1.86
XRN1-202ENST00000392981 LRATO95237 230 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 TOP3BO95985 862 aaKnown RBP3.44□□□□□ -1.86
XRN1-202ENST00000392981 GSRP00390 522 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 MYZAPP0CAP1 466 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 FOSL2P15408 326 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 PRKACBP22694 351 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 U2AF2P26368 475 aaKnown RBP eCLIP3.44□□□□□ -1.862e-8■□□□□ 10.6
XRN1-202ENST00000392981 YWHABP31946 246 aaKnown RBP3.44□□□□□ -1.86
XRN1-202ENST00000392981 SLC9A3P48764 834 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 CNN1P51911 297 aaKnown RBP3.44□□□□□ -1.86
XRN1-202ENST00000392981 BDH1Q02338 343 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 PRKCZQ05513 592 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 FOXM1Q08050 763 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 ZNF177Q13360 481 aaPredicted RBP3.44□□□□□ -1.86
XRN1-202ENST00000392981 ABI3BPQ7Z7G0 1075 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 IGFN1Q86VF2 1251 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 ANKRD46Q86W74 232 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 COMMD1Q8N668 190 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 CNBD1Q8NA66 436 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 PANX1Q96RD7 426 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 ADAM2Q99965 735 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 FUNDC2Q9BWH2 189 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 ROPN1BQ9BZX4 212 aaPredicted RBP3.44□□□□□ -1.86
XRN1-202ENST00000392981 POLR1EQ9GZS1 481 aaKnown RBP3.44□□□□□ -1.86
XRN1-202ENST00000392981 ADNPQ9H2P0 1102 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 PSTPIP2Q9H939 334 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 EQTNQ9NQ60 294 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 PRMT7Q9NVM4 692 aaPredicted RBP3.44□□□□□ -1.86
XRN1-202ENST00000392981 POLKQ9UBT6 870 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 SLC12A6Q9UHW9 1150 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 AMFRQ9UKV5 643 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 CROCC2H7BZ55 1655 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 MROH1Q8NDA8 1641 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 DHX29Q7Z478 1369 aaKnown RBP3.44□□□□□ -1.86
XRN1-202ENST00000392981 UTYO14607 1347 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 CASKO14936 926 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 KLHL2O95198 593 aa3.44□□□□□ -1.86
XRN1-202ENST00000392981 ZBTB11O95625 1053 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms