RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 TMLHEQ9NVH6 421 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 SESN1Q9Y6P5 492 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 SCN7AQ01118 1682 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 PAPPAQ13219 1627 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 DFNA5O60443 496 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 ELK4P28324 431 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 TMBIM6P55061 237 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 CAP1Q01518 475 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 EIF2B5Q13144 721 aaKnown RBP15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 IQCCQ4KMZ1 466 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 LAPTM4BQ86VI4 370 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 SEZ6LQ9BYH1 1024 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 TM9SF3Q9HD45 589 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 ARVCFO00192 962 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 NME4O00746 187 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 SLC30A4O14863 429 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 ZNF182P17025 639 aaPredicted RBP15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 TIE1P35590 1138 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 CASP9P55211 416 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 KCNAB2Q13303 367 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 SLC30A8Q8IWU4 369 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 COLGALT2Q8IYK4 626 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 CHCHD4Q8N4Q1 142 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 C9orf43Q8TAL5 461 aaPredicted RBP15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 SCLYQ96I15 445 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 KCNC2Q96PR1 638 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 TUBA1CQ9BQE3 449 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 DCSTAMPQ9H295 470 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 SYNDIG1Q9H7V2 258 aa15.73■□□□□ 0.11
PTPRN2-201ENST00000389413 NFATC2Q13469 925 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 TCEA2Q15560 299 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 SF1Q15637 639 aaKnown RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 MARCH8Q5T0T0 291 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 LDLRAD1Q5T700 205 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 ATG9BQ674R7 924 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 LRRC66Q68CR7 880 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 PSAPL1Q6NUJ1 521 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 CHST15Q7LFX5 561 aaPredicted RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 KLHL23Q8NBE8 558 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 SLAIN1Q8ND83 568 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 ZNF461Q8TAF7 563 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 SH3RF2Q8TEC5 729 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 SLC35A5Q9BS91 424 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 GSTO2Q9H4Y5 243 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 ZNF221Q9UK13 617 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 FBXO10Q9UK96 956 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 DIRAS1O95057 198 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 MATN4O95460 622 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 SRPRAP08240 638 aaKnown RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 TCF3P15923 654 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 SCN1BQ07699 218 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 C11orf88Q6PI97 169 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 CXXC5Q7LFL8 322 aaKnown RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 RGL4Q8IZJ4 473 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 OVCA2Q8WZ82 227 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 HSH2DQ96JZ2 352 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 MYRFLQ96LU7 910 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 CNPPD1Q9BV87 410 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 RIOK2Q9BVS4 552 aaKnown RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 POFUT2Q9Y2G5 429 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 NHSL1Q5SYE7 1610 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 PRSS51A0A1B0GVH4 220 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 ZNF865P0CJ78 1059 aaPredicted RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 CCR4P51679 360 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 SLBPQ14493 270 aaKnown RBP eCLIP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 FAM171BQ6P995 826 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 BRAT1Q6PJG6 821 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 LRRTM3Q86VH5 581 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 THOC6Q86W42 341 aaKnown RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 ZNF514Q96K75 400 aaPredicted RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 KCNH6Q9H252 994 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 ITM2CQ9NQX7 267 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 DNAAF2Q9NVR5 837 aaKnown RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 ARMC1Q9NVT9 282 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 THUMPD1Q9NXG2 353 aaKnown RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 A0A1W2PRU2 124 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 PITPNM1O00562 1244 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 OR1F1O43749 312 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 CHRNA1P02708 482 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 FGF4P08620 206 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 OR4D2P58180 307 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 NDUFA5Q16718 116 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 CMTR2Q8IYT2 770 aaKnown RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 GJD3Q8N144 294 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 KREMEN2Q8NCW0 462 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 ZSCAN5AQ9BUG6 496 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 ITPAQ9BY32 194 aa15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 TRIT1Q9H3H1 467 aaKnown RBP15.72■□□□□ 0.11
PTPRN2-201ENST00000389413 CACNB4O00305 520 aaPredicted RBP15.71■□□□□ 0.11
PTPRN2-201ENST00000389413 SAP18O00422 153 aaKnown RBP15.71■□□□□ 0.11
PTPRN2-201ENST00000389413 PDPK1O15530 556 aa15.71■□□□□ 0.11
PTPRN2-201ENST00000389413 CHST10O43529 356 aa15.71■□□□□ 0.11
PTPRN2-201ENST00000389413 HPRP00739 348 aa15.71■□□□□ 0.11
PTPRN2-201ENST00000389413 OPN1SWP03999 348 aa15.71■□□□□ 0.11
PTPRN2-201ENST00000389413 INHAP05111 366 aa15.71■□□□□ 0.11
PTPRN2-201ENST00000389413 SDC2P34741 201 aa15.71■□□□□ 0.11
PTPRN2-201ENST00000389413 ZFP69Q49AA0 526 aa15.71■□□□□ 0.11
PTPRN2-201ENST00000389413 C6orf141Q5SZD1 244 aa15.71■□□□□ 0.11
PTPRN2-201ENST00000389413 TNFAIP8L2Q6P589 184 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms