RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 ERVK-8P63133 956 aa20.48■□□□□ 0.87
NKX3-2-201ENST00000382438 MRPL28Q13084 256 aaKnown RBP20.48■□□□□ 0.87
NKX3-2-201ENST00000382438 DOC2BQ14184 412 aa20.48■□□□□ 0.87
NKX3-2-201ENST00000382438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.48■□□□□ 0.871e-19■■■■■ 52.3
NKX3-2-201ENST00000382438 PODNQ7Z5L7 613 aa20.48■□□□□ 0.87
NKX3-2-201ENST00000382438 KCNC2Q96PR1 638 aa20.48■□□□□ 0.87
NKX3-2-201ENST00000382438 ELOVL6Q9H5J4 265 aa20.48■□□□□ 0.87
NKX3-2-201ENST00000382438 RIMKLBQ9ULI2 386 aa20.48■□□□□ 0.87
NKX3-2-201ENST00000382438 BRCA1P38398 1863 aaKnown RBP20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 OR51F1A6NGY5 319 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 E9PAM4 449 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 M0R129 80 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 NPPAP01160 153 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 ATN1P54259 1190 aaPredicted RBP20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 PTPN5P54829 565 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 NPRL3Q12980 569 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 RIN1Q13671 783 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 PDZK1Q5T2W1 519 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 GALNT10Q86SR1 603 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 CDAN1Q8IWY9 1227 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 ZNF366Q8N895 744 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 ST8SIA4Q92187 359 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 GPRASP2Q96D09 838 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 TSPAN17Q96FV3 270 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 ACTL8Q9H568 366 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 SLC35C2Q9NQQ7 365 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 RAD18Q9NS91 495 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 FAM105AQ9NUU6 356 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 ZIM2Q9NZV7 527 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 NLKQ9UBE8 527 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 ZNF225Q9UK10 706 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 TRHDEQ9UKU6 1024 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 AUP1Q9Y679 476 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 A0A075B6Q4 140 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 A0A1W2PRG6 482 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 VPS4BO75351 444 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 CNPP09543 421 aaKnown RBP20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 CD1DP15813 335 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 TPI1P60174 286 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 MAB21L1Q13394 359 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 OTUD1Q5VV17 481 aaPredicted RBP20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 MYDGFQ969H8 173 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 CDK15Q96Q40 435 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 ERVW-1Q9UQF0 538 aa20.47■□□□□ 0.87
NKX3-2-201ENST00000382438 I6L893 689 aaPredicted RBP20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 FABP7O15540 132 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 AGTR2P50052 363 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 LCP2Q13094 533 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 FAM171A1Q5VUB5 890 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 AADATQ8N5Z0 425 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 TTC16Q8NEE8 873 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 CDT1Q9H211 546 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 C3orf14Q9HBI5 128 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 ZNF277Q9NRM2 450 aaPredicted RBP20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 TREX1Q9NSU2 369 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 GMEB2Q9UKD1 530 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 PCDHGA6Q9Y5G7 932 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 OR5K4A6NMS3 321 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 SUPT3HB4E1H0 165 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 ALDH1A1P00352 501 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 PAMP19021 973 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 MATKP42679 507 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 CLCN5P51795 746 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 CRY2Q49AN0 593 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 ANKRD54Q6NXT1 300 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 OR6P1Q8NGX9 317 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 BLOC1S5Q8TDH9 187 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 PYURFQ96I23 114 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 MS4A7Q9GZW8 240 aaPredicted RBP20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 ABCB9Q9NP78 766 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 PIGVQ9NUD9 493 aa20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 COL14A1Q05707 1796 aaKnown RBP20.46■□□□□ 0.87
NKX3-2-201ENST00000382438 PROS1P07225 676 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 LAMTOR4Q0VGL1 99 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 ST3GAL4Q11206 333 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 GRIK2Q13002 908 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 GPR68Q15743 365 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 SLC25A52Q3SY17 297 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 PYDC2Q56P42 97 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 OR52H1Q8NGJ2 320 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 PRMT6Q96LA8 375 aaPredicted RBP20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 SENP8Q96LD8 212 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 SPASTQ9UBP0 616 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 IKZF3Q9UKT9 509 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 VPS9D1Q9Y2B5 631 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 MRPS7Q9Y2R9 242 aaKnown RBP20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 KIAA1217Q5T5P2 1943 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 SMIM30A4D0T7 59 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 CLCA1A8K7I4 914 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 EFNA5P52803 228 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 NFKB2Q00653 900 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 CDH18Q13634 790 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 FGFBP1Q14512 234 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 SNX20Q7Z614 316 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 DNAJC22Q8N4W6 341 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 OR6C4Q8NGE1 309 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 RAET1EQ8TD07 263 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 ZNF419Q96HQ0 510 aaPredicted RBP20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 KLHL15Q96M94 604 aa20.45■□□□□ 0.86
NKX3-2-201ENST00000382438 DPCDQ9BVM2 203 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms