RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TRIM73Q86UV7 250 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 RCBTB1Q8NDN9 531 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 OR2A1Q8NGT9 310 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 OR56A3Q8NH54 315 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 ADAMTS14Q8WXS8 1223 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 ESAMQ96AP7 390 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 ARL8AQ96BM9 186 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 ALKBH8Q96BT7 664 aaKnown RBP12.22□□□□□ -0.45
SMN1-202ENST00000380707 MAP3K3Q99759 626 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 DPYSL5Q9BPU6 564 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 TMEM79Q9BSE2 394 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 ACAT2Q9BWD1 397 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 SGPP1Q9BX95 441 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 MKS1Q9NXB0 559 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 GRID1Q9ULK0 1009 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 PLLPQ9Y342 182 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 ASB1Q9Y576 335 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 FRYQ5TBA9 3013 aa12.22□□□□□ -0.45
SMN1-202ENST00000380707 IGHV5-51A0A0C4DH38 117 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 A8MU76 341 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 TYROBPO43914 113 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 KLK8O60259 260 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 PLIN3O60664 434 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 RASSF9O75901 435 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 PROCP04070 461 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 S100BP04271 92 aaPredicted RBP12.21□□□□□ -0.45
SMN1-202ENST00000380707 THRAP10827 490 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 GFAPP14136 432 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 OAS2P29728 719 aaKnown RBP12.21□□□□□ -0.45
SMN1-202ENST00000380707 RPA3P35244 121 aaPredicted RBP12.21□□□□□ -0.45
SMN1-202ENST00000380707 SLC6A12P48065 614 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 AGTR2P50052 363 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 SF1Q15637 639 aaKnown RBP12.21□□□□□ -0.45
SMN1-202ENST00000380707 SLC22A18Q96BI1 424 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 TLCD1Q96CP7 247 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 CCDC74BQ96LY2 380 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 OR4K3Q96R72 315 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 MIPEPQ99797 713 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 SH3GL2Q99962 352 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 PITPNM3Q9BZ71 974 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 CCDC177Q9NQR7 707 aaPredicted RBP12.21□□□□□ -0.45
SMN1-202ENST00000380707 WWOXQ9NZC7 414 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 TAC3Q9UHF0 121 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 PCDHB11Q9Y5F2 797 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 ACTL7BQ9Y614 415 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 CEP295Q9C0D2 2601 aa12.21□□□□□ -0.45
SMN1-202ENST00000380707 CELSR3Q9NYQ7 3312 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 TLCD2A6NGC4 264 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 G3V2L1 256 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 PVRP15151 417 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 NPPBP16860 134 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 HSPA7P48741 367 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 ALDH18A1P54886 795 aaKnown RBP12.21□□□□□ -0.46
SMN1-202ENST00000380707 MAGOHP61326 146 aaKnown RBP12.21□□□□□ -0.46
SMN1-202ENST00000380707 SLC5A12Q1EHB4 618 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 ISXQ2M1V0 245 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 CCDC153Q494R4 210 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 PHF19Q5T6S3 580 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 THEMIS2Q5TEJ8 643 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 CACHD1Q5VU97 1274 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 KIAA1614Q5VZ46 1190 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 CAPN13Q6MZZ7 669 aaPredicted RBP12.21□□□□□ -0.46
SMN1-202ENST00000380707 PRSS42Q7Z5A4 293 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 ARHGAP22Q7Z5H3 698 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 RAB44Q7Z6P3 723 aaPredicted RBP12.21□□□□□ -0.46
SMN1-202ENST00000380707 MARCH9Q86YJ5 346 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 TCAIMQ8N3R3 496 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 FBXO39Q8N4B4 442 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 CHCHD4Q8N4Q1 142 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 DCBLD1Q8N8Z6 715 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 OR2L3Q8NG85 312 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 TCP10LQ8TDR4 215 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 PHF21BQ96EK2 531 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 CD180Q99467 661 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 IQCGQ9H095 443 aaKnown RBP12.21□□□□□ -0.46
SMN1-202ENST00000380707 KLHL25Q9H0H3 589 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 STMN4Q9H169 189 aaPredicted RBP12.21□□□□□ -0.46
SMN1-202ENST00000380707 C1GALT1Q9NS00 363 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 SEMA5BQ9P283 1151 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 SLC17A7Q9P2U7 560 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 CLCA2Q9UQC9 943 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 SH2B3Q9UQQ2 575 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 SLC22A14Q9Y267 594 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 KLHL20Q9Y2M5 609 aa12.21□□□□□ -0.46
SMN1-202ENST00000380707 CACNA1AO00555 2505 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 LAMA5O15230 3695 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 IGKV1-8A0A0C4DH67 115 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 A0A0J9YY10 115 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 FAM149AA5PLN7 773 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 LRRC14BA6NHZ5 514 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 SLC9B1P1A6NJY1 282 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 A8MT66 165 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 AGRPO00253 132 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 TOX3O15405 576 aaPredicted RBP12.2□□□□□ -0.46
SMN1-202ENST00000380707 DLX3O60479 287 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 PRAMEF10O60809 474 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 SMIM24O75264 130 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 CSO75390 466 aaKnown RBP12.2□□□□□ -0.46
SMN1-202ENST00000380707 STK16O75716 305 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 SIX3O95343 332 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms