RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 HNRNPFP52597 415 aaKnown RBP20.94■□□□□ 0.94
TRIM54-202ENST00000380075 CYP4F3Q08477 520 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 SELPLGQ14242 412 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 FAM98BQ52LJ0 330 aaKnown RBP20.94■□□□□ 0.94
TRIM54-202ENST00000380075 SERPINA13PQ6UXR4 307 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 NRSN1Q8IZ57 195 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 OR2T12Q8NG77 320 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 HM13Q8TCT9 377 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 CYB5D2Q8WUJ1 264 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 ATL1Q8WXF7 558 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 P2RY13Q9BPV8 354 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 RMND5AQ9H871 391 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.94■□□□□ 0.94
TRIM54-202ENST00000380075 MAN2B2Q9Y2E5 1009 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 PLXNA2O75051 1894 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 FAM149AA5PLN7 773 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 PSMD11O00231 422 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 DFNA5O60443 496 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 RAP2AP10114 183 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 GSTT1P30711 240 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 ETV3P41162 512 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 ZXDCQ2QGD7 858 aaPredicted RBP20.94■□□□□ 0.94
TRIM54-202ENST00000380075 LIPJQ5W064 366 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 ERAP2Q6P179 960 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 MSANTD1Q6ZTZ1 278 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 TECPR1Q7Z6L1 1165 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 RIMKLAQ8IXN7 391 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 NAT16Q8N8M0 369 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 GLMNQ92990 594 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 OR52E6Q96RD3 313 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 ADI1Q9BV57 179 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 RIOK2Q9BVS4 552 aaKnown RBP20.94■□□□□ 0.94
TRIM54-202ENST00000380075 CHID1Q9BWS9 393 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 ZNF639Q9UID6 485 aa20.94■□□□□ 0.94
TRIM54-202ENST00000380075 MBD1Q9UIS9 605 aaPredicted RBP20.94■□□□□ 0.94
TRIM54-202ENST00000380075 TCF20Q9UGU0 1960 aaKnown RBP20.93■□□□□ 0.94
TRIM54-202ENST00000380075 JUPP14923 745 aa20.93■□□□□ 0.94
TRIM54-202ENST00000380075 MYF6P23409 242 aa20.93■□□□□ 0.94
TRIM54-202ENST00000380075 MAP4P27816 1152 aaKnown RBP20.93■□□□□ 0.94
TRIM54-202ENST00000380075 MERTKQ12866 999 aa20.93■□□□□ 0.94
TRIM54-202ENST00000380075 DHCR24Q15392 516 aa20.93■□□□□ 0.94
TRIM54-202ENST00000380075 RUNDC3AQ59EK9 446 aa20.93■□□□□ 0.94
TRIM54-202ENST00000380075 ATG9BQ674R7 924 aa20.93■□□□□ 0.94
TRIM54-202ENST00000380075 NEK5Q6P3R8 708 aa20.93■□□□□ 0.94
TRIM54-202ENST00000380075 TESCQ96BS2 214 aa20.93■□□□□ 0.94
TRIM54-202ENST00000380075 RMND5BQ96G75 393 aaPredicted RBP20.93■□□□□ 0.94
TRIM54-202ENST00000380075 UGT2B28Q9BY64 529 aa20.93■□□□□ 0.94
TRIM54-202ENST00000380075 KCNH6Q9H252 994 aa20.93■□□□□ 0.94
TRIM54-202ENST00000380075 H3BNH8 94 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 DLGAP1O14490 977 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 DEAF1O75398 565 aaPredicted RBP20.92■□□□□ 0.94
TRIM54-202ENST00000380075 PSIP1O75475 530 aaKnown RBP20.92■□□□□ 0.94
TRIM54-202ENST00000380075 CTSLP07711 333 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 MMP12P39900 470 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 DGKGP49619 791 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 TUBA4AP68366 448 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 LRIF1Q5T3J3 769 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 FRG2Q64ET8 278 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 BORAQ6PGQ7 559 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 KLHDC8AQ8IYD2 350 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 ZNF548Q8NEK5 533 aaPredicted RBP20.92■□□□□ 0.94
TRIM54-202ENST00000380075 TSPAN14Q8NG11 270 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 CSGALNACT1Q8TDX6 532 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 FRG2BQ96QU4 278 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 THUMPD3Q9BV44 507 aaKnown RBP20.92■□□□□ 0.94
TRIM54-202ENST00000380075 OBP2AQ9NY56 170 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 USP22Q9UPT9 525 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 SLC22A14Q9Y267 594 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 A0A096LPI6 279 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 TRBV5-3A0A0A0MS03 114 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 C16orf96A6NNT2 1141 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 ENO4A6NNW6 628 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 FADS2P1A8MWK0 482 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 GSTA4O15217 222 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 HOXC11O43248 304 aaPredicted RBP20.92■□□□□ 0.94
TRIM54-202ENST00000380075 ATG13O75143 517 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 MTX2O75431 263 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 SCELO95171 688 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 S100A3P33764 101 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 ST8SIA6P61647 398 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 ROR2Q01974 943 aaKnown RBP20.92■□□□□ 0.94
TRIM54-202ENST00000380075 CHRNB3Q05901 458 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 CSTF3Q12996 717 aaKnown RBP20.92■□□□□ 0.94
TRIM54-202ENST00000380075 SLC44A3Q8N4M1 653 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 SORCS1Q8WY21 1168 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 GLYATL1Q969I3 302 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 MTFMTQ96DP5 389 aaKnown RBP20.92■□□□□ 0.94
TRIM54-202ENST00000380075 METTL2AQ96IZ6 378 aaKnown RBP20.92■□□□□ 0.94
TRIM54-202ENST00000380075 ITCHQ96J02 903 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 RNF145Q96MT1 663 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 PIF1Q9H611 641 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 OLAHQ9NV23 265 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 SLC27A6Q9Y2P4 619 aa20.92■□□□□ 0.94
TRIM54-202ENST00000380075 MYOFQ9NZM1 2061 aa20.91■□□□□ 0.94
TRIM54-202ENST00000380075 PDLIM1O00151 329 aa20.91■□□□□ 0.94
TRIM54-202ENST00000380075 CLOCKO15516 846 aa20.91■□□□□ 0.94
TRIM54-202ENST00000380075 CISD3P0C7P0 127 aa20.91■□□□□ 0.94
TRIM54-202ENST00000380075 ADH5P11766 374 aa20.91■□□□□ 0.94
TRIM54-202ENST00000380075 PRLHRP49683 370 aa20.91■□□□□ 0.94
TRIM54-202ENST00000380075 SLC36A3Q495N2 470 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms