RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 LRRC34Q8IZ02 419 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 OR52B6Q8NGF0 335 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 RAB3IL1Q8TBN0 382 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 ZFPM2Q8WW38 1151 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 SMPDL3AQ92484 453 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 APOLD1Q96LR9 279 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 CDK15Q96Q40 435 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 SORT1Q99523 831 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 THAP1Q9NVV9 213 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 LRIT1Q9P2V4 623 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 DNAH14Q0VDD8 3507 aa13.64□□□□□ -0.23
HERPUD1-203ENST00000379792 RHPN2P1A8MT19 583 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 OR7A17O14581 309 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 PCDHGA12O60330 932 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 KDM1AO60341 852 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 CHRM5P08912 532 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 EPB42P16452 691 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 NPPBP16860 134 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 POLR2CP19387 275 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 SDHBP21912 280 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 MPSTP25325 297 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 PEBP1P30086 187 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 FASLGP48023 281 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 SH3BP2P78314 561 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 OCRLQ01968 901 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 ZCCHC8Q6NZY4 707 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 LRRC70Q7Z2Q7 622 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 ADGRF3Q8IZF5 1079 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 Q8N9G6 341 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 ATP6V1E2Q96A05 226 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 ZNF317Q96PQ6 595 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 SLC38A3Q99624 504 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 DUSP23Q9BVJ7 150 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 RAB11FIP5Q9BXF6 653 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 STN1Q9H668 368 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 MID1IP1Q9NPA3 183 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 FGFR1OP2Q9NVK5 253 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 PNPOQ9NVS9 261 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 TAC3Q9UHF0 121 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 PADI4Q9UM07 663 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 RALGAPA1Q6GYQ0 2036 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 CPED1A4D0V7 1026 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 ZNF839A8K0R7 811 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 ISM1B1AKI9 464 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 CDX4O14627 284 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 PRAMEF4O60810 478 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 KITP10721 976 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 ALDH4A1P30038 563 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 PPM1FP49593 454 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 CDC16Q13042 620 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 LCP2Q13094 533 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 PRAMEF9Q5VWM5 478 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 PRAMEF13Q5VWM6 474 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 ZNF438Q7Z4V0 828 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 SYVN1Q86TM6 617 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 KLHDC8AQ8IYD2 350 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 THOC1Q96FV9 657 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 PRR11Q96HE9 360 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 FAM107BQ9H098 131 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 OR6C2Q9NZP2 312 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 MARCOQ9UEW3 520 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 ZNF225Q9UK10 706 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 FIS1Q9Y3D6 152 aa13.63□□□□□ -0.23
HERPUD1-203ENST00000379792 ARID1BQ8NFD5 2236 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 LY6G6EA0A0G2JKS1 128 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 TMEM233B4DJY2 109 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 CASC3O15234 703 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 CCNG1P51959 295 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 OR1D5P58170 312 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 ERVPABLB-1P60509 514 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 CUZD1Q86UP6 607 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 MYLK4Q86YV6 388 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 RBM12BQ8IXT5 1001 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 ZNF781Q8N8C0 355 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 HMGCLL1Q8TB92 370 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 RSC1A1Q92681 617 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 NEIL2Q969S2 332 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 KCNA7Q96RP8 456 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 MIPEPQ99797 713 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 EDEM2Q9BV94 578 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 DNAAF2Q9NVR5 837 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 HRASLS2Q9NWW9 162 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 ZDHHC2Q9UIJ5 367 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 RNF11Q9Y3C5 154 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 U3KQA8 63 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 SPTBN4Q9H254 2564 aa13.62□□□□□ -0.23
HERPUD1-203ENST00000379792 GOLGA4Q13439 2230 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 PIPSLA2A3N6 862 aa13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 GSAPA4D1B5 854 aa13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 GMNCA6NCL1 334 aa13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 E7EQ34 232 aa13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 PRICKLE3O43900 615 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 EDF1O60869 148 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 UBXN7O94888 489 aa13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 OR4F21O95013 312 aa13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 MLYCDO95822 493 aa13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 PPP1CAP62136 330 aa13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 TRAF3Q13114 568 aa13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 SUZ12Q15022 739 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-203ENST00000379792 NR0B2Q15466 257 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms