RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 DKK4Q9UBT3 224 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 AK5Q9Y6K8 562 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 SPTBN2O15020 2390 aa18.06■□□□□ 0.48
SSU72-203ENST00000378725 CDRT15L2A8MXV6 281 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 TARM1B6A8C7 271 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 CTIFO43310 598 aaKnown RBP18.05■□□□□ 0.48
SSU72-203ENST00000378725 MSL3P1P0C860 447 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 CCND1P24385 295 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 PSMB5P28074 263 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 RBMS1P29558 406 aaKnown RBP18.05■□□□□ 0.48
SSU72-203ENST00000378725 RPA3P35244 121 aaPredicted RBP18.05■□□□□ 0.48
SSU72-203ENST00000378725 SLCO1A2P46721 670 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 ARL4DP49703 201 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 HNMTP50135 292 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 SH3BP2P78314 561 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 PRDX1Q06830 199 aaKnown RBP18.05■□□□□ 0.48
SSU72-203ENST00000378725 CYP4F3Q08477 520 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 NAE1Q13564 534 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 FOXR1Q6PIV2 292 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 FRA10AC1Q70Z53 315 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 CLEC14AQ86T13 490 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 FAM129CQ86XR2 697 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 CYP4X1Q8N118 509 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 PLD6Q8N2A8 252 aaKnown RBP18.05■□□□□ 0.48
SSU72-203ENST00000378725 C19orf47Q8N9M1 422 aaKnown RBP18.05■□□□□ 0.48
SSU72-203ENST00000378725 EPS8L3Q8TE67 593 aaKnown RBP18.05■□□□□ 0.48
SSU72-203ENST00000378725 ATOH8Q96SQ7 321 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 MIPEPQ99797 713 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 TMEM109Q9BVC6 243 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 ROPN1BQ9BZX4 212 aaPredicted RBP18.05■□□□□ 0.48
SSU72-203ENST00000378725 PCBD2Q9H0N5 130 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 ATG10Q9H0Y0 220 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 ALG9Q9H6U8 611 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 ROPN1Q9HAT0 212 aaPredicted RBP18.05■□□□□ 0.48
SSU72-203ENST00000378725 PDE7BQ9NP56 450 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 CCDC177Q9NQR7 707 aaPredicted RBP18.05■□□□□ 0.48
SSU72-203ENST00000378725 SLC39A1Q9NY26 324 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 TBK1Q9UHD2 729 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 PCDHGA7Q9Y5G6 932 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 PCDHGA3Q9Y5H0 932 aa18.05■□□□□ 0.48
SSU72-203ENST00000378725 CCDC151A5D8V7 595 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 NVLO15381 856 aaKnown RBP18.04■□□□□ 0.48
SSU72-203ENST00000378725 BRINP1O60477 761 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 PRAMEF10O60809 474 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 KERAO60938 352 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 CDH16O75309 829 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 EBLN1P0CF75 366 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 CMPK1P30085 196 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 GRIA3P42263 894 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 MAPK10P53779 464 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 RAB15P59190 212 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 ERVPABLB-1P60509 514 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 ABATP80404 500 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 ACY1Q03154 408 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 IL11RAQ14626 422 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 KCNAB1Q14722 419 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 TMTC4Q5T4D3 741 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 ICE2Q659A1 982 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 FCRL6Q6DN72 434 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 CAPN13Q6MZZ7 669 aaPredicted RBP18.04■□□□□ 0.48
SSU72-203ENST00000378725 FIGLAQ6QHK4 219 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 BPHLQ86WA6 291 aaPredicted RBP18.04■□□□□ 0.48
SSU72-203ENST00000378725 ACMSDQ8TDX5 336 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 USP7Q93009 1102 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 RHBDF1Q96CC6 855 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 ZNF578Q96N58 590 aaPredicted RBP18.04■□□□□ 0.48
SSU72-203ENST00000378725 DDA1Q9BW61 102 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 KLHL25Q9H0H3 589 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 FAM60AQ9NP50 221 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 INTS7Q9NVH2 962 aaKnown RBP18.04■□□□□ 0.48
SSU72-203ENST00000378725 TAC3Q9UHF0 121 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 RNF112Q9ULX5 631 aa18.04■□□□□ 0.48
SSU72-203ENST00000378725 KNTC1P50748 2209 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 C9orf172C9J069 976 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 MAP3K7O43318 606 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 ERLIN1O75477 346 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 CCNDBP1O95273 360 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 FGF5P12034 268 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 NPPBP16860 134 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 MAGP20916 626 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 GGT5P36269 586 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 GABRA4P48169 554 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 TBPL1P62380 186 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 YBX1P67809 324 aaKnown RBP18.03■□□□□ 0.48
SSU72-203ENST00000378725 NAA25Q14CX7 972 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 DCAF12Q5T6F0 453 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 SULT1C3Q6IMI6 304 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 KLC3Q6P597 504 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 CYB5D1Q6P9G0 228 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 LCTLQ6UWM7 567 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 CDHR3Q6ZTQ4 885 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 SH2D5Q6ZV89 423 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 KLHDC8AQ8IYD2 350 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 IQCKQ8N0W5 287 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 TCAIMQ8N3R3 496 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 RIBC1Q8N443 379 aaPredicted RBP18.03■□□□□ 0.48
SSU72-203ENST00000378725 DNAJC22Q8N4W6 341 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 PDPRQ8NCN5 879 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 HNRNPLLQ8WVV9 542 aaKnown RBP18.03■□□□□ 0.48
SSU72-203ENST00000378725 MED8Q96G25 268 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms