RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 PSIP1O75475 530 aaKnown RBP17.11■□□□□ 0.33
COMMD6-202ENST00000377612 BANF1O75531 89 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 SORBS2O94875 1100 aaKnown RBP17.11■□□□□ 0.33
COMMD6-202ENST00000377612 FOLR3P41439 243 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 CD97P48960 835 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 CTBP1Q13363 440 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 RAPSNQ13702 412 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 SF1Q15637 639 aaKnown RBP17.11■□□□□ 0.33
COMMD6-202ENST00000377612 CYP2A13Q16696 494 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 KLHL38Q2WGJ6 581 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 PRR30Q53SZ7 412 aaPredicted RBP17.11■□□□□ 0.33
COMMD6-202ENST00000377612 RNASEH2BQ5TBB1 312 aaKnown RBP17.11■□□□□ 0.33
COMMD6-202ENST00000377612 ARMC3Q5W041 872 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 CLEC18BQ6UXF7 455 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 TTLL10Q6ZVT0 673 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 RNF44Q7L0R7 432 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 SDCCAG8Q86SQ7 713 aaPredicted RBP17.11■□□□□ 0.33
COMMD6-202ENST00000377612 METTL27Q8N6F8 245 aaPredicted RBP17.11■□□□□ 0.33
COMMD6-202ENST00000377612 Q8NA96 180 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 CLEC18CQ8NCF0 446 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 OR2Y1Q8NGV0 311 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 GSDMBQ8TAX9 411 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 ACTRT1Q8TDG2 376 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 SLC22A18Q96BI1 424 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 NDC1Q9BTX1 674 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 GRPEL1Q9HAV7 217 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 INTS10Q9NVR2 710 aaKnown RBP17.11■□□□□ 0.33
COMMD6-202ENST00000377612 LUZP4Q9P127 313 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 SAMD15Q9P1V8 674 aa17.11■□□□□ 0.33
COMMD6-202ENST00000377612 SPTAN1Q13813 2472 aaKnown RBP17.1■□□□□ 0.33
COMMD6-202ENST00000377612 IGKV1-8A0A0C4DH67 115 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 A0A1B0GX78 115 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 FITM1A5D6W6 292 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 SDR42E2A6NKP2 422 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 A6NL46 340 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 USP27XA6NNY8 438 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 H3BMM5 538 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 NRDCO43847 1150 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 USP1O94782 785 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 PAMP19021 973 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 CHRM3P20309 590 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 CCNFP41002 786 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 FNTAP49354 379 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 SARNPP82979 210 aaKnown RBP17.1■□□□□ 0.33
COMMD6-202ENST00000377612 MED25Q71SY5 747 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 RBMXL3Q8N7X1 1067 aaKnown RBP17.1■□□□□ 0.33
COMMD6-202ENST00000377612 TMEM102Q8N9M5 508 aaPredicted RBP17.1■□□□□ 0.33
COMMD6-202ENST00000377612 SPSB2Q99619 263 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 SELENOSQ9BQE4 189 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 MESP1Q9BRJ9 268 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 CUTCQ9NTM9 273 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 CTSFQ9UBX1 484 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 NDOR1Q9UHB4 597 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 SNX12Q9UMY4 172 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 ICE1Q9Y2F5 2266 aa17.1■□□□□ 0.33
COMMD6-202ENST00000377612 UTP20O75691 2785 aaKnown RBP17.09■□□□□ 0.33
COMMD6-202ENST00000377612 LOC105369274A0A096LPK9 316 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 LOC102723532A0A0G2JNH3 316 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 OR2A25A4D2G3 310 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 DSCR3O14972 297 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 ALOX12BO75342 701 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 ONECUT2O95948 504 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 UQCRFS1P47985 274 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 VSX2P58304 361 aaPredicted RBP17.09■□□□□ 0.33
COMMD6-202ENST00000377612 SUSD1Q6UWL2 747 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 OR4N4Q8N0Y3 316 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 PPFIBP2Q8ND30 876 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 OR9A1PQ8NGU1 263 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 CD200R1Q8TD46 325 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 FKBP10Q96AY3 582 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 C10orf90Q96M02 699 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 FOPNLQ96NB1 174 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 PKP4Q99569 1192 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 C17orf62Q9BQA9 187 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 ACAT2Q9BWD1 397 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 DDX47Q9H0S4 455 aaKnown RBP17.09■□□□□ 0.33
COMMD6-202ENST00000377612 PLAC1Q9HBJ0 212 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 INTS7Q9NVH2 962 aaKnown RBP17.09■□□□□ 0.33
COMMD6-202ENST00000377612 P4HTMQ9NXG6 502 aa17.09■□□□□ 0.33
COMMD6-202ENST00000377612 STOX2Q9P2F5 926 aaPredicted RBP17.09■□□□□ 0.33
COMMD6-202ENST00000377612 GPN3Q9UHW5 284 aaPredicted RBP17.09■□□□□ 0.33
COMMD6-202ENST00000377612 USP9YO00507 2555 aaPredicted RBP17.08■□□□□ 0.33
COMMD6-202ENST00000377612 A0A0J9YVX5 310 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 TARM1B6A8C7 271 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 FKBP9O95302 570 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 ALAS2P22557 587 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 TIAL1Q01085 375 aaKnown RBP eCLIP17.08■□□□□ 0.32
COMMD6-202ENST00000377612 SSPNQ14714 243 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 MSS51Q4VC12 460 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 ZC3H12BQ5HYM0 836 aaKnown RBP17.08■□□□□ 0.32
COMMD6-202ENST00000377612 DCAF10Q5QP82 559 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 TTC23LQ6PF05 361 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 DLG3Q92796 817 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 SMAD5Q99717 465 aaKnown RBP17.08■□□□□ 0.32
COMMD6-202ENST00000377612 WDR83Q9BRX9 315 aaKnown RBP17.08■□□□□ 0.32
COMMD6-202ENST00000377612 TRMT1Q9NXH9 659 aaKnown RBP17.08■□□□□ 0.32
COMMD6-202ENST00000377612 GPR83Q9NYM4 423 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 SLC17A6Q9P2U8 582 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 ZNF451Q9Y4E5 1061 aa17.08■□□□□ 0.32
COMMD6-202ENST00000377612 MRFAP1Q9Y605 127 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms