RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ULK1O75385 1050 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 CCNDBP1O95273 360 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 FABP3P05413 133 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 LPOP22079 712 aaPredicted RBP16.08■□□□□ 0.16
TRIM39-201ENST00000376656 GJA5P36382 358 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 RACK1P63244 317 aaKnown RBP16.08■□□□□ 0.16
TRIM39-201ENST00000376656 SLC39A12Q504Y0 691 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 GATAD2AQ86YP4 633 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 THEM5Q8N1Q8 247 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 GPR152Q8TDT2 470 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 PITX2Q99697 317 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 CENPOQ9BU64 300 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 CEP44Q9C0F1 390 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 ANGPTL3Q9Y5C1 460 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 PCDHGA6Q9Y5G7 932 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 FAM172BPA6NC97 362 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 DRGXA6NNA5 263 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 ZW10O43264 779 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 MED26O95402 600 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 HOXB9P17482 250 aaPredicted RBP16.07■□□□□ 0.16
TRIM39-201ENST00000376656 GPR153Q6NV75 609 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 ADAMTSL2Q86TH1 951 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 P3H2Q8IVL5 708 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 OR7D4Q8NG98 312 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 FCGR1BQ92637 280 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 MGME1Q9BQP7 344 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 TRPV5Q9NQA5 729 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 C14orf119Q9NWQ9 140 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 A3GALT2U3KPV4 340 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 PDZK1P1A8MUH7 402 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 TLL1O43897 1013 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 CD9P21926 228 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 S100A3P33764 101 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 OR2B6P58173 313 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 BEX3Q00994 111 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 NXNL2Q5VZ03 156 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 NUAK2Q9H093 628 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 RNF38Q9H0F5 515 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 DDX28Q9NUL7 540 aaKnown RBP16.07■□□□□ 0.16
TRIM39-201ENST00000376656 PCDHGC4Q9Y5F7 938 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 CENPFP49454 3210 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 C17orf102A2RUQ5 167 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 M0QZQ0 153 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 RPLP0P05388 317 aaKnown RBP16.07■□□□□ 0.16
TRIM39-201ENST00000376656 CLCN4P51793 760 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 CRISP3P54108 245 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 CAMK2GQ13555 558 aaPredicted RBP16.07■□□□□ 0.16
TRIM39-201ENST00000376656 ZCCHC8Q6NZY4 707 aaKnown RBP16.07■□□□□ 0.16
TRIM39-201ENST00000376656 NPLOC4Q8TAT6 608 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 SDHCQ99643 169 aaPredicted RBP16.07■□□□□ 0.16
TRIM39-201ENST00000376656 APOL5Q9BWW9 433 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 AASDHPPTQ9NRN7 309 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 THUMPD1Q9NXG2 353 aaKnown RBP16.07■□□□□ 0.16
TRIM39-201ENST00000376656 PSORS1C1Q9UIG5 152 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 SCML2Q9UQR0 700 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 MAN2B2Q9Y2E5 1009 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 DHRS7Q9Y394 339 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 MICAL3Q7RTP6 2002 aa16.07■□□□□ 0.16
TRIM39-201ENST00000376656 A8MV72 311 aaPredicted RBP16.06■□□□□ 0.16
TRIM39-201ENST00000376656 TPD52L2O43399 206 aaKnown RBP16.06■□□□□ 0.16
TRIM39-201ENST00000376656 HOXB6P17509 224 aaKnown RBP16.06■□□□□ 0.16
TRIM39-201ENST00000376656 HTR3AP46098 478 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 YBEYP58557 167 aaPredicted RBP16.06■□□□□ 0.16
TRIM39-201ENST00000376656 ELP6Q0PNE2 266 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 TBCEQ15813 527 aaPredicted RBP16.06■□□□□ 0.16
TRIM39-201ENST00000376656 ALG1LQ6GMV1 187 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 TRIM46Q7Z4K8 759 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 TSSK3Q96PN8 268 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 KCNC2Q96PR1 638 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 EGFL8Q99944 293 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 CHCHD6Q9BRQ6 235 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 VPS4AQ9UN37 437 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 ARIH1Q9Y4X5 557 aaPredicted RBP16.06■□□□□ 0.16
TRIM39-201ENST00000376656 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 LOC730098B7Z3J9 87 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 HAS3O00219 553 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 MANBAO00462 879 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 APOA1P02647 267 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 CTSHP09668 335 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 HOXD9P28356 352 aaPredicted RBP16.06■□□□□ 0.16
TRIM39-201ENST00000376656 NUDT6P53370 316 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 DEFA1P59665 94 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 DEFA3P59666 94 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 RPS14P62263 151 aaKnown RBP16.06■□□□□ 0.16
TRIM39-201ENST00000376656 TMC5Q6UXY8 1006 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 TLK2Q86UE8 772 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 KBTBD8Q8NFY9 601 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 ABCG8Q9H221 673 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 WDR70Q9NW82 654 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 CCDC59Q9P031 241 aaKnown RBP16.06■□□□□ 0.16
TRIM39-201ENST00000376656 PPT2Q9UMR5 302 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 BOLA1Q9Y3E2 137 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 LRATO95237 230 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 FKBP9O95302 570 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 ESR1P03372 595 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 SEMG1P04279 462 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 TACR1P25103 407 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 GRK4P32298 578 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 FAHD1Q6P587 224 aa16.06■□□□□ 0.16
TRIM39-201ENST00000376656 CARNMT1Q8N4J0 409 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms