RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 OR51B5Q9H339 312 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 IFT46Q9NQC8 304 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 RNF186Q9NXI6 227 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 NCDNQ9UBB6 729 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 PCDHGA11Q9Y5H2 935 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 ZNF208O43345 1280 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 POLR2CP19387 275 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 UFM1P61960 85 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 RPS13P62277 151 aaKnown RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 PTP4A2Q12974 167 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 IFI44LQ53G44 452 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 DCAKDQ8WVC6 231 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 SORCS1Q8WY21 1168 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 B3GNT4Q9C0J1 378 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 IL21RQ9HBE5 538 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 CENPMQ9NSP4 180 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 IRAK3Q9Y616 596 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 ZNF860A6NHJ4 632 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 TMEM150CB9EJG8 249 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 AHSGP02765 367 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 LYNP07948 512 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 ZNF613Q6PF04 617 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 LRRTM4Q86VH4 590 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 TBL1XR1Q9BZK7 514 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 KLRF1Q9NZS2 232 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 ABI3Q9P2A4 366 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 SCML2Q9UQR0 700 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 ANKRD26Q9UPS8 1709 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 MTMR11A4FU01 709 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 TULP3O75386 442 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 CSF2RAP15509 400 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 BLKP51451 505 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 TBC1D25Q3MII6 688 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 ARHGAP40Q5TG30 622 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 GATSQ8NAP1 163 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 BPIFB1Q8TDL5 484 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 OR52B2Q96RD2 323 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 TOR3AQ9H497 397 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 SEC61A2Q9H9S3 476 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 NPHS1O60500 1241 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 OGNP20774 298 aaKnown RBP16.75■□□□□ 0.27
MCF2L-203ENST00000375604 CLCN4P51793 760 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 ZDHHC24Q6UX98 284 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 MBOAT1Q6ZNC8 495 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 NUP54Q7Z3B4 507 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 COL21A1Q96P44 957 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 WBP11Q9Y2W2 641 aaKnown RBP16.75■□□□□ 0.27
MCF2L-203ENST00000375604 TLL2Q9Y6L7 1015 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 PLIN4Q96Q06 1357 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 SLC35G1Q2M3R5 365 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 RFTN2Q52LD8 501 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-203ENST00000375604 WDR60Q8WVS4 1066 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 ZBED6CLQ96FA7 236 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-203ENST00000375604 GSDMCQ9BYG8 508 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 SNTG1Q9NSN8 517 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 C2orf78A6NCI8 922 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 COCHO43405 550 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 CHST10O43529 356 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 GDI2P50395 445 aaKnown RBP16.75■□□□□ 0.27
MCF2L-203ENST00000375604 PPP3R1P63098 170 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 SLC25A11Q02978 314 aaKnown RBP16.75■□□□□ 0.27
MCF2L-203ENST00000375604 MFSD5Q6N075 450 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 OR4F6Q8NGB9 312 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 LDAHQ9H6V9 325 aa16.75■□□□□ 0.27
MCF2L-203ENST00000375604 EDDM13A0A1B0GTR0 161 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 CBFBQ13951 182 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 SMCO1Q147U7 214 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 COL1A1P02452 1464 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-203ENST00000375604 TBX1O43435 398 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 PI15O43692 258 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 KERAO60938 352 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 SLC7A1P30825 629 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 OR2AP1Q8NGE2 309 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 FUBP3Q96I24 572 aaKnown RBP eCLIP16.74■□□□□ 0.27
MCF2L-203ENST00000375604 PCBD2Q9H0N5 130 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 CRTAC1Q9NQ79 661 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 RUVBL1Q9Y265 456 aaKnown RBP16.74■□□□□ 0.27
MCF2L-203ENST00000375604 A8MT66 165 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 FAM72CH0Y354 149 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 AGPSO00116 658 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 CRTC2Q53ET0 693 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-203ENST00000375604 FAM72AQ5TYM5 149 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 FAM72DQ6L9T8 149 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 FBXO42Q6P3S6 717 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 FAM72BQ86X60 149 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 ARMC10Q8N2F6 343 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 PROKR2Q8NFJ6 384 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 C12orf42Q96LP6 360 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 IL4I1Q96RQ9 567 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 VPS29Q9UBQ0 182 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 ASLP04424 464 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 LINGO3P0C6S8 592 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 CXCR1P25024 350 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 VARSP26640 1264 aaKnown RBP16.74■□□□□ 0.27
MCF2L-203ENST00000375604 PTGES3Q15185 160 aaKnown RBP16.74■□□□□ 0.27
MCF2L-203ENST00000375604 ULK3Q6PHR2 472 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 OLFML1Q6UWY5 402 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 EBF2Q9HAK2 575 aa16.74■□□□□ 0.27
MCF2L-203ENST00000375604 ZCCHC3Q9NUD5 404 aaKnown RBP16.74■□□□□ 0.27
MCF2L-203ENST00000375604 ING4Q9UNL4 249 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms