RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 VMP1Q96GC9 406 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 TSEN34Q9BSV6 310 aaKnown RBP9.52□□□□□ -0.89
CSMD2-203ENST00000373377 RNF38Q9H0F5 515 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 TNKS2Q9H2K2 1166 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 ELOVL6Q9H5J4 265 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 POPDC3Q9HBV1 291 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 AASDHPPTQ9NRN7 309 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 RAD18Q9NS91 495 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 SIRT5Q9NXA8 310 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 OGDHLQ9ULD0 1010 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 RNF6Q9Y252 685 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 ARIH1Q9Y4X5 557 aaPredicted RBP9.52□□□□□ -0.89
CSMD2-203ENST00000373377 FRMPD3Q5JV73 1810 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 FAM47E-STBD1D6RA91 191 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 ARNTLO00327 626 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 AREL1O15033 823 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 NPPAP01160 153 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 STSP08842 583 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 ITPKAP23677 461 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 HOXC8P31273 242 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 RPL9P32969 192 aaKnown RBP9.52□□□□□ -0.89
CSMD2-203ENST00000373377 OR1E2P47887 323 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 RPS14P62263 151 aaKnown RBP9.52□□□□□ -0.89
CSMD2-203ENST00000373377 EIF4EBP2Q13542 120 aaPredicted RBP9.52□□□□□ -0.89
CSMD2-203ENST00000373377 TAF1AQ15573 450 aaPredicted RBP9.52□□□□□ -0.89
CSMD2-203ENST00000373377 PARP15Q460N3 678 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 ARTNQ5T4W7 220 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 NADSYN1Q6IA69 706 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 TCAIMQ8N3R3 496 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 AADATQ8N5Z0 425 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 HSH2DQ96JZ2 352 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 RDH12Q96NR8 316 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 TTPALQ9BTX7 342 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 NUAK2Q9H093 628 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 ASB8Q9H765 288 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 GKN1Q9NS71 199 aa9.52□□□□□ -0.89
CSMD2-203ENST00000373377 THUMPD1Q9NXG2 353 aaKnown RBP9.52□□□□□ -0.89
CSMD2-203ENST00000373377 PNMA8CA0A1B0GUJ8 204 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 ANKRD66B4E2M5 251 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 TPD52L2O43399 206 aaKnown RBP9.51□□□□□ -0.89
CSMD2-203ENST00000373377 TLL1O43897 1013 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 B4GALT3O60512 393 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 APOA1P02647 267 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 IL6P05231 212 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 FABP3P05413 133 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 NUDT7P0C024 238 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 EPB42P16452 691 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 CA5AP35218 305 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 MAD2L1BPQ15013 274 aaPredicted RBP9.51□□□□□ -0.89
CSMD2-203ENST00000373377 ACOX1Q15067 660 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 USP39Q53GS9 565 aaKnown RBP9.51□□□□□ -0.89
CSMD2-203ENST00000373377 MORN1Q5T089 497 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 GDF6Q6KF10 455 aaPredicted RBP9.51□□□□□ -0.89
CSMD2-203ENST00000373377 SBSNQ6UWP8 590 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 VASH1Q7L8A9 365 aaPredicted RBP9.51□□□□□ -0.89
CSMD2-203ENST00000373377 GALNT7Q86SF2 657 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 GPR149Q86SP6 731 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 METTL4Q8N3J2 472 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 PARP16Q8N5Y8 322 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 ZNF486Q96H40 463 aaPredicted RBP9.51□□□□□ -0.89
CSMD2-203ENST00000373377 SLC39A13Q96H72 371 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 C1orf74Q96LT6 269 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 CENPOQ9BU64 300 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 ITPAQ9BY32 194 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 TRIM39Q9HCM9 518 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 ARL15Q9NXU5 204 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 ITGB1BP2Q9UKP3 347 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 FCF1Q9Y324 198 aaKnown RBP9.51□□□□□ -0.89
CSMD2-203ENST00000373377 TRPV2Q9Y5S1 764 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 PRSS21Q9Y6M0 314 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 NT5C1B-RDH14C9J2C7 533 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 IFRD1O00458 451 aaPredicted RBP9.51□□□□□ -0.89
CSMD2-203ENST00000373377 CTDSP2O14595 271 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 PRAMEF1O95521 474 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 PDYNP01213 254 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 RHOCP08134 193 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 ENGP17813 658 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 SLC6A4P31645 630 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 RYKP34925 604 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 GRK5P34947 590 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 CPT1AP50416 773 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 ACVR1Q04771 509 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 HSPA14Q0VDF9 509 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 TUSC3Q13454 348 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 RFX4Q33E94 735 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 UAP1L1Q3KQV9 507 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 CTXN3Q4LDR2 81 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 SPANXN2Q5MJ10 180 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 FAM171A1Q5VUB5 890 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 ADAMTSL2Q86TH1 951 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 SERPINA9Q86WD7 417 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 CCDC71Q8IV32 467 aaPredicted RBP9.51□□□□□ -0.89
CSMD2-203ENST00000373377 CLECL1Q8IZS7 167 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 NLGN4XQ8N0W4 816 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 TEX26Q8N6G2 289 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 PSD2Q9BQI7 771 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 TTYH2Q9BSA4 534 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 FAM126AQ9BYI3 521 aaPredicted RBP9.51□□□□□ -0.89
CSMD2-203ENST00000373377 ATG10Q9H0Y0 220 aa9.51□□□□□ -0.89
CSMD2-203ENST00000373377 FBXO8Q9NRD0 319 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms