RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 KIF17Q9P2E2 1029 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 CHD5Q8TDI0 1954 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 PCDHGA12O60330 932 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 ZNF7P17097 686 aaPredicted RBP17.6■□□□□ 0.41
HNF4A-203ENST00000372920 CTPS1P17812 591 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 LIPAP38571 399 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 PCYT1AP49585 367 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 CLK1P49759 484 aaKnown RBP17.6■□□□□ 0.41
HNF4A-203ENST00000372920 CREMQ03060 361 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 DSC1Q08554 894 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 ZNF404Q494X3 552 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 CERS6Q6ZMG9 384 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 HORMAD1Q86X24 394 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 KIAA1958Q8N8K9 716 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 ATG16L2Q8NAA4 619 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 SIGLEC11Q96RL6 698 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 NACA2Q9H009 215 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 SAMHD1Q9Y3Z3 626 aaKnown RBP17.6■□□□□ 0.41
HNF4A-203ENST00000372920 PCDHB9Q9Y5E1 797 aa17.6■□□□□ 0.41
HNF4A-203ENST00000372920 ISPDA4D126 451 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 TBX1O43435 398 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 PDYNP01213 254 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 FABP3P05413 133 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 AKR1A1P14550 325 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 EFNA1P20827 205 aaPredicted RBP17.59■□□□□ 0.41
HNF4A-203ENST00000372920 DGKAP23743 735 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 SEPHS1P49903 392 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 PROX2Q3B8N5 592 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 ATAD3BQ5T9A4 648 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 ZCCHC8Q6NZY4 707 aaKnown RBP17.59■□□□□ 0.41
HNF4A-203ENST00000372920 GLB1LQ6UWU2 654 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 APH1BQ8WW43 257 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 IPCEF1Q8WWN9 437 aaPredicted RBP17.59■□□□□ 0.41
HNF4A-203ENST00000372920 SLC38A4Q969I6 547 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 CTRCQ99895 268 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 ITPAQ9BY32 194 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 RFXANKO14593 260 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 LRATO95237 230 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 PPP3CCP48454 512 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 HNRNPFP52597 415 aaKnown RBP17.59■□□□□ 0.41
HNF4A-203ENST00000372920 UBE2UQ5VVX9 321 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 STEAP3Q658P3 488 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 DENND1CQ8IV53 801 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 UBTD2Q8WUN7 234 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 SIAEQ9HAT2 523 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 ILVBLA1L0T0 632 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 CLDN11O75508 207 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 PRAMEF1O95521 474 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 ALPIP09923 528 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 RPP38P78345 283 aaKnown RBP17.59■□□□□ 0.41
HNF4A-203ENST00000372920 ARF5P84085 180 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 PRSS36Q5K4E3 855 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 NCEH1Q6PIU2 408 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 CYP2U1Q7Z449 544 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 SLC22A15Q8IZD6 547 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 MMP27Q9H306 513 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 PRDM8Q9NQV8 689 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 SIRT5Q9NXA8 310 aa17.59■□□□□ 0.41
HNF4A-203ENST00000372920 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.59■□□□□ 0.41
HNF4A-203ENST00000372920 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.58■□□□□ 0.41
HNF4A-203ENST00000372920 INPPL1O15357 1258 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 DUSP11O75319 330 aaKnown RBP17.58■□□□□ 0.41
HNF4A-203ENST00000372920 CD160O95971 181 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 SEMG1P04279 462 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 ZDHHC11BP0C7U3 371 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 HMGCLP35914 325 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 SLC11A2P49281 568 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 MTA1Q13330 715 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 ZNF177Q13360 481 aaPredicted RBP17.58■□□□□ 0.41
HNF4A-203ENST00000372920 TTLL9Q3SXZ7 439 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 ELMOD1Q8N336 334 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 BEND7Q8N7W2 519 aaPredicted RBP17.58■□□□□ 0.41
HNF4A-203ENST00000372920 POC5Q8NA72 575 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 DNASE1L2Q92874 299 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 TXNDC15Q96J42 360 aa17.58■□□□□ 0.41
HNF4A-203ENST00000372920 PABPN1LA6NDY0 278 aaKnown RBP17.58■□□□□ 0.4
HNF4A-203ENST00000372920 AGAP5A6NIR3 686 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 METTL15A6NJ78 407 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 AIREO43918 545 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 CLDN9O95484 217 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 KRT6AP02538 564 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 KRT6BP04259 564 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 RPS3P23396 243 aaKnown RBP eCLIP17.58■□□□□ 0.43e-7■□□□□ 9.4
HNF4A-203ENST00000372920 RCVRNP35243 200 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 KRT6CP48668 564 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 ARHGEF7Q14155 803 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 SERPINA11Q86U17 422 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 AKAP14Q86UN6 197 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 RASAL3Q86YV0 1011 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 ENTHD1Q8IYW4 607 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 ZBTB2Q8N680 514 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 TRPV1Q8NER1 839 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 SLC29A3Q9BZD2 475 aa17.58■□□□□ 0.4
HNF4A-203ENST00000372920 GAPDHSO14556 408 aaPredicted RBP17.57■□□□□ 0.4
HNF4A-203ENST00000372920 STK16O75716 305 aa17.57■□□□□ 0.4
HNF4A-203ENST00000372920 KCNK2O95069 426 aa17.57■□□□□ 0.4
HNF4A-203ENST00000372920 NEK2P51955 445 aa17.57■□□□□ 0.4
HNF4A-203ENST00000372920 TUBA1BP68363 451 aa17.57■□□□□ 0.4
HNF4A-203ENST00000372920 NPRL3Q12980 569 aa17.57■□□□□ 0.4
HNF4A-203ENST00000372920 ZNF181Q2M3W8 571 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms