RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 C2orf73Q8N5S3 287 aaPredicted RBP18.12■□□□□ 0.49
TMEM53-201ENST00000372235 FBXO15Q8NCQ5 510 aaPredicted RBP18.12■□□□□ 0.49
TMEM53-201ENST00000372235 OR2L3Q8NG85 312 aa18.12■□□□□ 0.49
TMEM53-201ENST00000372235 ANP32BQ92688 251 aaKnown RBP18.12■□□□□ 0.49
TMEM53-201ENST00000372235 MS4A14Q96JA4 679 aa18.12■□□□□ 0.49
TMEM53-201ENST00000372235 ZNF285Q96NJ3 590 aa18.12■□□□□ 0.49
TMEM53-201ENST00000372235 SMAD5Q99717 465 aaKnown RBP18.12■□□□□ 0.49
TMEM53-201ENST00000372235 SLC26A1Q9H2B4 701 aa18.12■□□□□ 0.49
TMEM53-201ENST00000372235 CUTCQ9NTM9 273 aa18.12■□□□□ 0.49
TMEM53-201ENST00000372235 NFS1Q9Y697 457 aa18.12■□□□□ 0.49
TMEM53-201ENST00000372235 MAD1L1Q9Y6D9 718 aa18.12■□□□□ 0.49
TMEM53-201ENST00000372235 MYO1CO00159 1063 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 HCRTR1O43613 425 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 VPS4BO75351 444 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 TTC4O95801 387 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 ERVK-10P10266 1014 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 ERGP11308 486 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 TCP1P17987 556 aaKnown RBP18.11■□□□□ 0.49
TMEM53-201ENST00000372235 RPA3P35244 121 aaPredicted RBP18.11■□□□□ 0.49
TMEM53-201ENST00000372235 BDKRB1P46663 353 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 TERF1P54274 439 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 EMP3P54852 163 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 KLHL38Q2WGJ6 581 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 VWA5B1Q5TIE3 1220 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 ANKRD22Q5VYY1 191 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 OVCH1Q7RTY7 1134 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 FDCSPQ8NFU4 85 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 MIB2Q96AX9 1013 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 RUNDC3BQ96NL0 473 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 VPS4AQ9UN37 437 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 NEU2Q9Y3R4 380 aa18.11■□□□□ 0.49
TMEM53-201ENST00000372235 K7EM74 188 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 SMAPO00193 183 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 TXNDC9O14530 226 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 PRPF4O43172 522 aaKnown RBP eCLIP18.1■□□□□ 0.49
TMEM53-201ENST00000372235 ZBTB14O43829 449 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 MPC1LP0DKB6 136 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 MAGEA3P43357 314 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 GCGRP47871 477 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 CLCN7P51798 805 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 RELAQ04206 551 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 DCAF10Q5QP82 559 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 NAT8LQ8N9F0 302 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.1■□□□□ 0.49
TMEM53-201ENST00000372235 OR2A1Q8NGT9 310 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 INPP5DQ92835 1189 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 MIPEPQ99797 713 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 EBNA1BP2Q99848 306 aaKnown RBP18.1■□□□□ 0.49
TMEM53-201ENST00000372235 ZFYVE21Q9BQ24 234 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 GRPEL1Q9HAV7 217 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 MRPS30Q9NP92 439 aaKnown RBP18.1■□□□□ 0.49
TMEM53-201ENST00000372235 ATP13A2Q9NQ11 1180 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 C20orf96Q9NUD7 363 aaPredicted RBP18.1■□□□□ 0.49
TMEM53-201ENST00000372235 CIDEBQ9UHD4 219 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 SNX12Q9UMY4 172 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 CDC14AQ9UNH5 594 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 KLHL20Q9Y2M5 609 aa18.1■□□□□ 0.49
TMEM53-201ENST00000372235 ZCWPW2A0A1B0GU75 182 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 GOLGA8MH3BSY2 632 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 AGPSO00116 658 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 PDGFAP04085 211 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 MMP11P24347 488 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 SKIV2L2P42285 1042 aaKnown RBP18.09■□□□□ 0.49
TMEM53-201ENST00000372235 CARSP49589 748 aaKnown RBP18.09■□□□□ 0.49
TMEM53-201ENST00000372235 SOX8P57073 446 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 ABATP80404 500 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 AIMP2Q13155 320 aaKnown RBP18.09■□□□□ 0.49
TMEM53-201ENST00000372235 MUM1Q2TAK8 710 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 WASHC2DQ5SRD0 308 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 IRAK1BP1Q5VVH5 260 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 RNF44Q7L0R7 432 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 FAM20CQ8IXL6 584 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 SLC35F6Q8N357 371 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 PNPLA2Q96AD5 504 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 MVB12AQ96EY5 273 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 SLAMF7Q9NQ25 335 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 SEMA3GQ9NS98 782 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 P4HTMQ9NXG6 502 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 DHRS7Q9Y394 339 aa18.09■□□□□ 0.49
TMEM53-201ENST00000372235 HYKKA2RU49 373 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 OR2A25A4D2G3 310 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 PGAM1P18669 254 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 HRH2P25021 359 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 PNLIPRP1P54315 467 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 VSX2P58304 361 aaPredicted RBP18.08■□□□□ 0.48
TMEM53-201ENST00000372235 OCA2Q04671 838 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 UBAP2LQ14157 1087 aaKnown RBP18.08■□□□□ 0.48
TMEM53-201ENST00000372235 MYBPC3Q14896 1274 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 IGFBP7Q16270 282 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 ACSBG2Q5FVE4 666 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 SYDE1Q6ZW31 735 aaPredicted RBP18.08■□□□□ 0.48
TMEM53-201ENST00000372235 REXO1L1PQ8IX06 675 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 PALM2Q8IXS6 379 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 GALNT16Q8N428 558 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 GALNT11Q8NCW6 608 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 CPT1CQ8TCG5 803 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 SLCO2A1Q92959 643 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 DPH7Q9BTV6 452 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 NUDT9Q9BW91 350 aa18.08■□□□□ 0.48
TMEM53-201ENST00000372235 ZNF304Q9HCX3 659 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms