RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 CDC23Q9UJX2 597 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 SLC39A10Q9ULF5 831 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 G3BP2Q9UN86 482 aaKnown RBP12.59□□□□□ -0.39
RPF1-201ENST00000370654 PCDHGA10Q9Y5H3 936 aa12.59□□□□□ -0.39
RPF1-201ENST00000370654 A0A0J9YVX5 310 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 FITM1A5D6W6 292 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 VSTM2BA6NLU5 285 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 FFAR3O14843 346 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 GPR42O15529 346 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 AVILO75366 819 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 VAPBO95292 243 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 RPS3P23396 243 aaKnown RBP eCLIP12.58□□□□□ -0.4
RPF1-201ENST00000370654 ITGA3P26006 1051 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 GLRBP48167 497 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 TTPAP49638 278 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 ARSFP54793 590 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 GBX1Q14549 363 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 RPS6KA1Q15418 735 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 CCNG2Q16589 344 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 FBXO42Q6P3S6 717 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 PRSS58Q8IYP2 241 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 IQCKQ8N0W5 287 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 OR2L3Q8NG85 312 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 SKA2Q8WVK7 121 aaPredicted RBP12.58□□□□□ -0.4
RPF1-201ENST00000370654 LPGAT1Q92604 370 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 DLG3Q92796 817 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 PEX13Q92968 403 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 FKBP10Q96AY3 582 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 SLC22A18Q96BI1 424 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 SLC30A3Q99726 388 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 BARD1Q99728 777 aaKnown RBP12.58□□□□□ -0.4
RPF1-201ENST00000370654 ILKAPQ9H0C8 392 aaPredicted RBP12.58□□□□□ -0.4
RPF1-201ENST00000370654 SLC26A1Q9H2B4 701 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 EIF2B3Q9NR50 452 aaKnown RBP12.58□□□□□ -0.4
RPF1-201ENST00000370654 ENAMQ9NRM1 1142 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 GNPTGQ9UJJ9 305 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 ANAPC5Q9UJX4 755 aa12.58□□□□□ -0.4
RPF1-201ENST00000370654 DRG1Q9Y295 367 aaKnown RBP12.58□□□□□ -0.4
RPF1-201ENST00000370654 HYKKA2RU49 373 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 WIPF3A6NGB9 483 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 KDM1AO60341 852 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 NDUFS3O75489 264 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 LDLRP01130 860 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 RPN2P04844 631 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 AIMP2Q13155 320 aaKnown RBP12.57□□□□□ -0.4
RPF1-201ENST00000370654 GRM7Q14831 915 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 TMED2Q15363 201 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 TRIP13Q15645 432 aaPredicted RBP12.57□□□□□ -0.4
RPF1-201ENST00000370654 ACSBG2Q5FVE4 666 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 ZC3H12BQ5HYM0 836 aaKnown RBP12.57□□□□□ -0.4
RPF1-201ENST00000370654 AARS2Q5JTZ9 985 aaKnown RBP12.57□□□□□ -0.4
RPF1-201ENST00000370654 PRAMEF13Q5VWM6 474 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 ANKRD22Q5VYY1 191 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 ZNF787Q6DD87 383 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 DRICH1Q6PGQ1 229 aaPredicted RBP12.57□□□□□ -0.4
RPF1-201ENST00000370654 LAPTM4BQ86VI4 370 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 RAD51AP1Q96B01 352 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 C8orf44Q96CB5 159 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 C10orf90Q96M02 699 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 KIFC1Q9BW19 673 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 ACAT2Q9BWD1 397 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 TSSK1BQ9BXA7 367 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 WDR54Q9H977 334 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 ZC3H7BQ9UGR2 993 aaKnown RBP12.57□□□□□ -0.4
RPF1-201ENST00000370654 CRYL1Q9Y2S2 319 aa12.57□□□□□ -0.4
RPF1-201ENST00000370654 PRRC2CQ9Y520 2896 aaKnown RBP12.57□□□□□ -0.4
RPF1-201ENST00000370654 IGKV1-8A0A0C4DH67 115 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 ARHGEF33A8MVX0 844 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 TARM1B6A8C7 271 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 KLHL18O94889 574 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 MATN4O95460 622 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 FGGP02679 453 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 ALBP02768 609 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 ALPPP05187 535 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 CD63P08962 238 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 CXCR5P32302 372 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 PPARGP37231 505 aaPredicted RBP12.56□□□□□ -0.4
RPF1-201ENST00000370654 NPY2RP49146 381 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 EFNA3P52797 238 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 TYSND1Q2T9J0 566 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 VWA2Q5GFL6 755 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 SUSD1Q6UWL2 747 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 IGFL2Q6UWQ7 119 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 CENPUQ71F23 418 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 RNF44Q7L0R7 432 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 OTOAQ7RTW8 1153 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 TXLNBQ8N3L3 684 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 ZADH2Q8N4Q0 377 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 OTUD6BQ8N6M0 293 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 CATSPER1Q8NEC5 780 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 OR11G2Q8NGC1 345 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 HMGCLL1Q8TB92 370 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 ZUFSPQ96AP4 578 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 PANX3Q96QZ0 392 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 SLC29A3Q9BZD2 475 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 IL22Q9GZX6 179 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 LZTFL1Q9NQ48 299 aa12.56□□□□□ -0.4
RPF1-201ENST00000370654 INTS7Q9NVH2 962 aaKnown RBP12.56□□□□□ -0.4
RPF1-201ENST00000370654 CUEDC1Q9NWM3 386 aaPredicted RBP12.56□□□□□ -0.4
RPF1-201ENST00000370654 NOVA2Q9UNW9 492 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms