RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TRBV5-4A0A0C4DH59 114 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 IGHV5-10-1A0A0J9YXX1 117 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 PRSS38A1L453 326 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 B4DGG1 531 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 SUPT3HB4E1H0 165 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 C3orf80F5H4A9 247 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 F8W8V4 182 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 UBXN8O00124 270 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 CACNB4O00305 520 aaPredicted RBP9.7□□□□□ -0.86
TPM3-210ENST00000368530 CDC7O00311 574 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 BTN3A1O00481 513 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 SMIM24O75264 130 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 SUPT3HO75486 399 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 CPNE6O95741 557 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 SLC26A3P40879 764 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 ETV3P41162 512 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 SPINT3P49223 89 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 MAZP56270 477 aaKnown RBP9.7□□□□□ -0.86
TPM3-210ENST00000368530 ASPHQ12797 758 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 SQSTM1Q13501 440 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 TSNQ15631 228 aaKnown RBP9.7□□□□□ -0.86
TPM3-210ENST00000368530 ARL13AQ5H913 290 aaPredicted RBP9.7□□□□□ -0.86
TPM3-210ENST00000368530 COLEC12Q5KU26 742 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 VWA5B1Q5TIE3 1220 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 LYPLAL1Q5VWZ2 237 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 MAVSQ7Z434 540 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 WDR75Q8IWA0 830 aaKnown RBP9.7□□□□□ -0.86
TPM3-210ENST00000368530 NXPE1Q8N323 547 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 EEF1AKMT1Q8WVE0 214 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 SCAMP4Q969E2 229 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 NKD1Q969G9 470 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 RILPQ96NA2 401 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 EBF4Q9BQW3 602 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 ARHGAP9Q9BRR9 750 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 SPATA16Q9BXB7 569 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 TEX101Q9BY14 249 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 DRC3Q9H069 523 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 CDH19Q9H159 772 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 GEMIN8Q9NWZ8 242 aaKnown RBP9.7□□□□□ -0.86
TPM3-210ENST00000368530 GNPTGQ9UJJ9 305 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 RNF112Q9ULX5 631 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 PCDHGA3Q9Y5H0 932 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 COMMD10Q9Y6G5 202 aa9.7□□□□□ -0.86
TPM3-210ENST00000368530 PPM1DO15297 605 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 IPO13O94829 963 aaKnown RBP9.69□□□□□ -0.86
TPM3-210ENST00000368530 SLC25A14O95258 325 aaPredicted RBP9.69□□□□□ -0.86
TPM3-210ENST00000368530 ELFN1P0C7U0 828 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 SFTPCP11686 197 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 TSPAN8P19075 237 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 KELP23276 732 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 CD82P27701 267 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 CLCN7P51798 805 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 ALDH18A1P54886 795 aaKnown RBP9.69□□□□□ -0.86
TPM3-210ENST00000368530 DNAJB13P59910 316 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
TPM3-210ENST00000368530 ACOX1Q15067 660 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 GALNTL6Q49A17 601 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 GPR33Q49SQ1 333 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 PHF19Q5T6S3 580 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 Q6ZVL8 140 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 DET1Q7L5Y6 550 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 NAGSQ8N159 534 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 NKAPQ8N5F7 415 aaKnown RBP9.69□□□□□ -0.86
TPM3-210ENST00000368530 PTGR2Q8N8N7 351 aaPredicted RBP9.69□□□□□ -0.86
TPM3-210ENST00000368530 RCBTB1Q8NDN9 531 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 PATE1Q8WXA2 126 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 KCNJ9Q92806 393 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 PPP1R36Q96LQ0 422 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 RIOK2Q9BVS4 552 aaKnown RBP9.69□□□□□ -0.86
TPM3-210ENST00000368530 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 KRTAP3-2Q9BYR7 98 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 SPRY4Q9C004 299 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 DERL2Q9GZP9 239 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 ILKAPQ9H0C8 392 aaPredicted RBP9.69□□□□□ -0.86
TPM3-210ENST00000368530 WWP1Q9H0M0 922 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 SLC25A18Q9H1K4 315 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 TFB2MQ9H5Q4 396 aaKnown RBP9.69□□□□□ -0.86
TPM3-210ENST00000368530 WDR26Q9H7D7 661 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 ACTR5Q9H9F9 607 aaPredicted RBP9.69□□□□□ -0.86
TPM3-210ENST00000368530 TAAR2Q9P1P5 351 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 SLC12A4Q9UP95 1085 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 TRIM33Q9UPN9 1127 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 FIS1Q9Y3D6 152 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 RAP2CQ9Y3L5 183 aa9.69□□□□□ -0.86
TPM3-210ENST00000368530 HEMK1Q9Y5R4 338 aaPredicted RBP9.69□□□□□ -0.86
TPM3-210ENST00000368530 RELNP78509 3460 aa9.68□□□□□ -0.86
TPM3-210ENST00000368530 LRRC14BA6NHZ5 514 aa9.68□□□□□ -0.86
TPM3-210ENST00000368530 NCF1BA6NI72 391 aaPredicted RBP9.68□□□□□ -0.86
TPM3-210ENST00000368530 NCF1CA8MVU1 366 aaPredicted RBP9.68□□□□□ -0.86
TPM3-210ENST00000368530 FCHO1O14526 889 aa9.68□□□□□ -0.86
TPM3-210ENST00000368530 NPHS1O60500 1241 aa9.68□□□□□ -0.86
TPM3-210ENST00000368530 DIAPH2O60879 1101 aa9.68□□□□□ -0.86
TPM3-210ENST00000368530 MTX2O75431 263 aa9.68□□□□□ -0.86
TPM3-210ENST00000368530 TSPAN12O95859 305 aa9.68□□□□□ -0.86
TPM3-210ENST00000368530 TPBGLP0DKB5 382 aa9.68□□□□□ -0.86
TPM3-210ENST00000368530 MYCLP1P12525 358 aaPredicted RBP9.68□□□□□ -0.86
TPM3-210ENST00000368530 GFAPP14136 432 aa9.68□□□□□ -0.86
TPM3-210ENST00000368530 NCF1P14598 390 aaPredicted RBP9.68□□□□□ -0.86
TPM3-210ENST00000368530 ZNF30P17039 623 aa9.68□□□□□ -0.86
TPM3-210ENST00000368530 RPS3P23396 243 aaKnown RBP eCLIP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms