RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ARHGAP19Q14CB8 494 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 TGIF1Q15583 401 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 SF1Q15637 639 aaKnown RBP14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 PPP1R3AQ16821 1122 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 DEFB110Q30KQ9 67 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 MROH9Q5TGP6 573 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 TRMT10CQ7L0Y3 403 aaKnown RBP14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 SYTL1Q8IYJ3 562 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 MCOLN3Q8TDD5 553 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC44A1Q8WWI5 657 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 SLC22A18Q96BI1 424 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 ZNF501Q96CX3 271 aaPredicted RBP14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 ASPSCR1Q9BZE9 553 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 PDE7BQ9NP56 450 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 ABCF3Q9NUQ8 709 aa14.52□□□□□ -0.08
SMPDL3A-201ENST00000368440 ABHD2P08910 425 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 SLC35E2BP0CK96 405 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 CCDC166P0CW27 439 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 FGF5P12034 268 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 TSNQ15631 228 aaKnown RBP14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 ZXDCQ2QGD7 858 aaPredicted RBP14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 FCRL6Q6DN72 434 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 ZNF248Q8NDW4 579 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 OR2L3Q8NG85 312 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 SMPDL3AQ92484 453 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 SPRY4Q9C004 299 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 B3GNT4Q9C0J1 378 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 UTP6Q9NYH9 597 aaKnown RBP14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 TAC3Q9UHF0 121 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 PCDHB11Q9Y5F2 797 aa14.52□□□□□ -0.09
SMPDL3A-201ENST00000368440 LAMA5O15230 3695 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 TEX51A0A1B0GUA7 166 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 H3BQF6 201 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 AGPSO00116 658 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 CTSBP07858 339 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 GCAP28676 217 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 GABRA4P48169 554 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 CSRP3P50461 194 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 ACY1Q03154 408 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 DLG1Q12959 904 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 IL11RAQ14626 422 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 TMTC4Q5T4D3 741 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 DCAKDQ8WVC6 231 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 KCNE4Q8WWG9 221 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 CCDC138Q96M89 665 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 TEFMQ96QE5 360 aaKnown RBP14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 DERL2Q9GZP9 239 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 ATG10Q9H0Y0 220 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 SLC6A20Q9NP91 592 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 RARRES3Q9UL19 164 aa14.51□□□□□ -0.09
SMPDL3A-201ENST00000368440 CFAP47Q6ZTR5 3102 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 TMEM150CB9EJG8 249 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 STK17BO94768 372 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 GUCA1CO95843 209 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 INHBAP08476 426 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 CD1DP15813 335 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 ITPKBP27987 946 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 RPA3P35244 121 aaPredicted RBP14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 HSD17B2P37059 387 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 GRIA3P42263 894 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 TBPL1P62380 186 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 IRF9Q00978 393 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 GPS2Q13227 327 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 CLN3Q13286 438 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 COL9A2Q14055 689 aaPredicted RBP14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 CSHL1Q14406 222 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 SLC29A2Q14542 456 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 PRAMEF17Q5VTA0 474 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 PWWP2BQ6NUJ5 590 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 AGTRAPQ6RW13 159 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 RAPH1Q70E73 1250 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 TIPARPQ7Z3E1 657 aaKnown RBP14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 PPP1R3BQ86XI6 285 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 OR1L3Q8NH93 324 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 TCTN2Q96GX1 697 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 UBXN10Q96LJ8 280 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 CENPHQ9H3R5 247 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 SNX15Q9NRS6 342 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 ARL15Q9NXU5 204 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 CTNNAL1Q9UBT7 734 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 EXOC1LA0A1B0GW35 172 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 SMIM23A6NLE4 172 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 ALDOAP04075 364 aaKnown RBP14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 SHBGP04278 402 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 LIPCP11150 499 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 IFFO1Q0D2I5 559 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 SRSF6Q13247 344 aaKnown RBP14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 HSP90B2PQ58FF3 399 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 FIGLAQ6QHK4 219 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 DTX1Q86Y01 620 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 SPACA3Q8IXA5 215 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 IQCKQ8N0W5 287 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 DNAJC22Q8N4W6 341 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 PTERQ96BW5 349 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 ZPBPQ9BS86 351 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 PILRAQ9UKJ1 303 aa14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 NOVA2Q9UNW9 492 aaKnown RBP14.5□□□□□ -0.09
SMPDL3A-201ENST00000368440 SH2B3Q9UQQ2 575 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms