RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 TSSK1BQ9BXA7 367 aa12.95□□□□□ -0.34
PMF1-202ENST00000368277 ATP13A2Q9NQ11 1180 aa12.95□□□□□ -0.34
PMF1-202ENST00000368277 TREX1Q9NSU2 369 aa12.95□□□□□ -0.34
PMF1-202ENST00000368277 PAK5Q9P286 719 aa12.95□□□□□ -0.34
PMF1-202ENST00000368277 GALPQ9UBC7 116 aa12.95□□□□□ -0.34
PMF1-202ENST00000368277 GNPTGQ9UJJ9 305 aa12.95□□□□□ -0.34
PMF1-202ENST00000368277 ANAPC5Q9UJX4 755 aa12.95□□□□□ -0.34
PMF1-202ENST00000368277 PCDHGA10Q9Y5H3 936 aa12.95□□□□□ -0.34
PMF1-202ENST00000368277 CENPEQ02224 2701 aa12.95□□□□□ -0.34
PMF1-202ENST00000368277 ITPR2Q14571 2701 aa12.95□□□□□ -0.34
PMF1-202ENST00000368277 NOTCH2Q04721 2471 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 A0A1W2PPV9 198 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 CBX6O95503 412 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 C1orf105O95561 183 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 RPN2P04844 631 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 ALPPP05187 535 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 EIF2S1P05198 315 aaKnown RBP12.94□□□□□ -0.34
PMF1-202ENST00000368277 FMO4P31512 558 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 Q0VFX4 171 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 RBBP7Q16576 425 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 CRB2Q5IJ48 1285 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.94□□□□□ -0.34
PMF1-202ENST00000368277 AARS2Q5JTZ9 985 aaKnown RBP12.94□□□□□ -0.34
PMF1-202ENST00000368277 WASHC2DQ5SRD0 308 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 KIRREL2Q6UWL6 708 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 HPS6Q86YV9 775 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 ZADH2Q8N4Q0 377 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 TTC29Q8NA56 475 aaPredicted RBP12.94□□□□□ -0.34
PMF1-202ENST00000368277 FKBP10Q96AY3 582 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 C8orf44Q96CB5 159 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 CNDP1Q96KN2 507 aa12.94□□□□□ -0.34
PMF1-202ENST00000368277 NOVA2Q9UNW9 492 aaKnown RBP12.94□□□□□ -0.34
PMF1-202ENST00000368277 ANKUB1A6NFN9 424 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 F8W8V4 182 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 NDUFS3O75489 264 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 VAPBO95292 243 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 LDLRP01130 860 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 MMP11P24347 488 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 TTPAP49638 278 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 VPS41P49754 854 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 ARSFP54793 590 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 AIMP2Q13155 320 aaKnown RBP12.93□□□□□ -0.34
PMF1-202ENST00000368277 TSTA3Q13630 321 aaPredicted RBP12.93□□□□□ -0.34
PMF1-202ENST00000368277 GRM7Q14831 915 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 RPS6KA1Q15418 735 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 TRIP13Q15645 432 aaPredicted RBP12.93□□□□□ -0.34
PMF1-202ENST00000368277 MEI1Q5TIA1 1274 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 PRAMEF13Q5VWM6 474 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 MYO7BQ6PIF6 2116 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 SUSD1Q6UWL2 747 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 LINC00696Q6ZRV3 163 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 Q6ZS92 163 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 NLRP9Q7RTR0 991 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 OTOAQ7RTW8 1153 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 MPP5Q8N3R9 675 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 OR2L3Q8NG85 312 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 C10orf90Q96M02 699 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 ZNF285Q96NJ3 590 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 FRMD8P1Q9BZ68 369 aaPredicted RBP12.93□□□□□ -0.34
PMF1-202ENST00000368277 ABCF3Q9NUQ8 709 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 INTS7Q9NVH2 962 aaKnown RBP12.93□□□□□ -0.34
PMF1-202ENST00000368277 ZC3H7BQ9UGR2 993 aaKnown RBP12.93□□□□□ -0.34
PMF1-202ENST00000368277 CRYL1Q9Y2S2 319 aa12.93□□□□□ -0.34
PMF1-202ENST00000368277 COPG1Q9Y678 874 aaKnown RBP12.93□□□□□ -0.34
PMF1-202ENST00000368277 CELSR2Q9HCU4 2923 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 POLEQ07864 2286 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 HYKKA2RU49 373 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 ARHGEF33A8MVX0 844 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 AVILO75366 819 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 STATHP02808 62 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 CELA2AP08217 269 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 RPS3P23396 243 aaKnown RBP eCLIP12.92□□□□□ -0.346e-6■■■□□ 17.9
PMF1-202ENST00000368277 PPARGP37231 505 aaPredicted RBP12.92□□□□□ -0.34
PMF1-202ENST00000368277 SNRPNP63162 240 aaKnown RBP12.92□□□□□ -0.34
PMF1-202ENST00000368277 SRSF11Q05519 484 aaKnown RBP12.92□□□□□ -0.34
PMF1-202ENST00000368277 KLC1Q07866 573 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 TUBB8Q3ZCM7 444 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 ACSBG2Q5FVE4 666 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 VWA2Q5GFL6 755 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 ZC3H12BQ5HYM0 836 aaKnown RBP12.92□□□□□ -0.34
PMF1-202ENST00000368277 IGFL3Q6UXB1 125 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 GSTA5Q7RTV2 222 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 SHISA5Q8N114 240 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 TXLNBQ8N3L3 684 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 RNF10Q8N5U6 811 aaKnown RBP12.92□□□□□ -0.34
PMF1-202ENST00000368277 PPFIBP2Q8ND30 876 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 OR11G2Q8NGC1 345 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 OR2A1Q8NGT9 310 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 GSDMBQ8TAX9 411 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 LPGAT1Q92604 370 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 RAD51AP1Q96B01 352 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 SLC22A18Q96BI1 424 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 THOC3Q96J01 351 aaKnown RBP12.92□□□□□ -0.34
PMF1-202ENST00000368277 BIRC8Q96P09 236 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 PANX3Q96QZ0 392 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 SLC30A3Q99726 388 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 WDR77Q9BQA1 342 aaPredicted RBP12.92□□□□□ -0.34
PMF1-202ENST00000368277 CRB3Q9BUF7 120 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 ZNF160Q9HCG1 818 aa12.92□□□□□ -0.34
PMF1-202ENST00000368277 LZTFL1Q9NQ48 299 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms