RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 BTN3A1O00481 513 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 DNALI1O14645 258 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 APOL1O14791 398 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 LIN7AO14910 233 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 LRRTM2O43300 516 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ZNF749O43361 778 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 LIASO43766 372 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PEX1O43933 1283 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ZG16O60844 167 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 EDF1O60869 148 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SOCS5O75159 536 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 FKBP6O75344 327 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SPAG7O75391 227 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 RFPL1O75677 317 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 FAM155BO75949 473 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TMEM63AO94886 807 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 UBOX5O94941 541 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SNUPNO95149 360 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 STATHP02808 62 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 KRT1P04264 644 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 EIF2S1P05198 315 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 APOA4P06727 396 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 KLK3P07288 261 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 F7P08709 466 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 KRT16P08779 473 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 RBP3P10745 1247 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PYGBP11216 843 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MTHFD1P11586 935 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 FGF5P12034 268 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MLNP12872 115 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 F3P13726 295 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CPA3P15088 417 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ST6GAL1P15907 406 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PECAM1P16284 738 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 NELFEP18615 380 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 XRCC1P18887 633 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 NFKB1P19838 968 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 NCF2P19878 526 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MSH3P20585 1137 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MX2P20592 715 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CYP2A7P20853 494 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CCNCP24863 283 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ITGA3P26006 1051 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PTPN3P26045 913 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CD82P27701 267 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 RBL1P28749 1068 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 GRNP28799 593 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TYK2P29597 1187 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PRDX3P30048 256 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ECHS1P30084 290 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ADSLP30566 484 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 AKT1P31749 480 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 FOXN2P32314 431 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CD68P34810 354 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CRHR1P34998 444 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PTPN7P35236 360 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SPRP35270 261 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 FDFT1P37268 417 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SPAM1P38567 509 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 DCTP40126 519 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 VHLP40337 213 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ELK3P41970 407 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 HALP42357 657 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MLLT3P42568 568 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CDKN2BP42772 138 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 OR1D4P47884 311 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 FASLGP48023 281 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PREPP48147 710 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 VPS41P49754 854 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 CLCN2P51788 898 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PGDP52209 483 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 KPNA2P52292 529 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ZNF135P52742 658 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PRKAA2P54646 552 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 AIF1P55008 147 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 WNT3AP56704 352 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 WDR4P57081 412 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 KCNK10P57789 538 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 RAB15P59190 212 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ESRRGP62508 458 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 YBX1P67809 324 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 IRX1P78414 480 aaPredicted RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MRPS35P82673 323 aaKnown RBP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 XIAPP98170 497 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MC1RQ01726 317 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 OCRLQ01968 901 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SLC18A2Q05940 514 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 DPTQ07507 201 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 KLC1Q07866 573 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 GALNT2Q10471 571 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 WASHC5Q12768 1159 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SF3A3Q12874 501 aaKnown RBP eCLIP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PRKAA1Q13131 559 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 STX5Q13190 355 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 SQSTM1Q13501 440 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 MED21Q13503 144 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 ART3Q13508 389 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TRA2AQ13595 282 aaKnown RBP eCLIP1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 PEX6Q13608 980 aa1.49□□□□□ -2.17
RNU1-42P-201ENST00000364033 TSTA3Q13630 321 aaPredicted RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms