RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 HSD3B2P26439 372 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 POU1F1P28069 291 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 RPL21P46778 160 aaKnown RBP-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 TRPC1P48995 793 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 ERVK-16P61578 105 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 HLTFQ14527 1009 aaKnown RBP eCLIP-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 TOR1AIP1Q5JTV8 583 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 FAM71E1Q6IPT2 247 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 SCARA5Q6ZMJ2 495 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 SYT13Q7L8C5 426 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 TADA2BQ86TJ2 420 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 ERI1Q8IV48 349 aaKnown RBP-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 RASGEF1CQ8N431 466 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 ARRDC1Q8N5I2 433 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 C14orf178Q8N769 122 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 OR1J2Q8NGS2 313 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 SCAMP5Q8TAC9 235 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 SHROOM3Q8TF72 1996 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 KCNE4Q8WWG9 221 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 DAZLQ92904 295 aaKnown RBP-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 KTI12Q96EK9 354 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 RBM17Q96I25 401 aaKnown RBP-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 SLC22A12Q96S37 553 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 RIOK1Q9BRS2 568 aaKnown RBP-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 SLC17A9Q9BYT1 436 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 NYXQ9GZU5 481 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 FAM49AQ9H0Q0 323 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 SIL1Q9H173 461 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 EPHX3Q9H6B9 360 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 NANOGQ9H9S0 305 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 ARFGAP3Q9NP61 516 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 FGF21Q9NSA1 209 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 KLRF1Q9NZS2 232 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 PDP2Q9P2J9 529 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 STK39Q9UEW8 545 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 B3GALT5Q9Y2C3 310 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 CYP46A1Q9Y6A2 500 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 DMBT1Q9UGM3 2413 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 IGKV1D-43A0A0B4J1Z2 117 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 TRGV8A0A0C4DH27 118 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 A0A1B0GUA9 196 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 MED19A0JLT2 244 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 ANKRD61A6NGH8 418 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 J3QRE1 110 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 TSPAN6O43657 245 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 GPX5O75715 221 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 DDHD2O94830 711 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 DANCRP0C864 163 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 PRKAR1AP10644 381 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 RPA1P27694 616 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 RXRGP48443 463 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 CASP5P51878 434 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 NEK2P51955 445 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 NDST1P52848 882 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 SLC25A1P53007 311 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 SUCLG1P53597 346 aaKnown RBP-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 HMGCS2P54868 508 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 HERVK_113P61574 105 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 AMPD3Q01432 767 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 GCNT1Q02742 428 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 DMPKQ09013 629 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 PRR4Q16378 134 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 UPP1Q16831 310 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 LINC00483Q53H64 154 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 CBWD5Q5RIA9 395 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 AGAP6Q5VW22 663 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 ADAMTSL5Q6ZMM2 481 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 RRAGAQ7L523 313 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 CCDC13Q8IYE1 715 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 CPSF7Q8N684 471 aaKnown RBP-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 OR13C3Q8NGS6 347 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 FAM71BQ8TC56 605 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 PHLDA1Q8WV24 401 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 SH3KBP1Q96B97 665 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 FOPNLQ96NB1 174 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 RUNDC3BQ96NL0 473 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 MCCC1Q96RQ3 725 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 NUP85Q9BW27 656 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 ULBP2Q9BZM5 246 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 OR2B2Q9GZK3 357 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 DENND2DQ9H6A0 471 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 HPS4Q9NQG7 708 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 DDX21Q9NR30 783 aaKnown RBP eCLIP-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 SAMSN1Q9NSI8 373 aaKnown RBP-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 NLGN3Q9NZ94 848 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 NPAP1Q9NZP6 1156 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 PEMTQ9UBM1 199 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 MTMR6Q9Y217 621 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 TBX22Q9Y458 520 aa-0.52□□□□□ -2.49
RNU6-340P-201ENST00000364005 IGLV4-69A0A075B6H9 119 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 TRBV6-6A0A0A6YYG2 114 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 ACTL6BO94805 426 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 PRAMEF12O95522 483 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 P0C880 135 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 ADORA3P0DMS8 318 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 CGB3P0DN86 165 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 RNH1P13489 461 aaKnown RBP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 LGALS3P17931 250 aaKnown RBP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 PKLRP30613 574 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 TNFRSF4P43489 277 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms