RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 HMOX2P30519 316 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 KIR2DL1P43626 348 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 DCDC1P59894 354 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 B2MP61769 119 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 GALNT1Q10472 559 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 MRPL28Q13084 256 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 PRKG2Q13237 762 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ART3Q13508 389 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 HTR4Q13639 388 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 DDX39BQ13838 428 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 CEACAM7Q14002 265 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 EIF4HQ15056 248 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 RPS6KA2Q15349 733 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 NR6A1Q15406 480 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 SKIV2LQ15477 1246 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 TBCCQ15814 346 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 CCDC6Q16204 474 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 GSTA3Q16772 222 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 WSCD2Q2TBF2 565 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 RFTN2Q52LD8 501 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 TMEM196Q5HYL7 178 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 REP15Q6BDI9 236 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 DUS1LQ6P1R4 473 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 FIP1L1Q6UN15 594 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 CHSY3Q70JA7 882 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 FAM20CQ8IXL6 584 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 KYQ8NBH2 561 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 OR14C36Q8NHC7 312 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 TMEM159Q96B96 161 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 LRIG1Q96JA1 1093 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 FAR2Q96K12 515 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 IL17FQ96PD4 163 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF382Q96SR6 550 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 AIFM2Q9BRQ8 373 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 RTKNQ9BST9 563 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 PCDHAC1Q9H158 963 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 WDR41Q9HAD4 459 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 MRPL40Q9NQ50 206 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ADA2Q9NZK5 511 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 SLAMF8Q9P0V8 285 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 MOSPD1Q9UJG1 213 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 SORCS3Q9UPU3 1222 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 SH2B3Q9UQQ2 575 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 PLEKHM1Q9Y4G2 1056 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 POLR3HQ9Y535 204 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 PRAMEF33A0A0G2JMD5 474 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 CXorf51AA0A1B0GTR3 108 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 MAGEA13PA6NCF6 341 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 C1QTNF3-AMACRE9PGA6 284 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 K7EPI3 171 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SLC31A1O15431 190 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 HNRNPCL1O60812 293 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ATG13O75143 517 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 MLYCDO95822 493 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SLC16A8O95907 504 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 FUCA1P04066 466 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ANXA5P08758 320 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 G6PDP11413 515 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 LBPP18428 481 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 M6PRP20645 277 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 FUT4P22083 530 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 IL12AP29459 219 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 CTHP32929 405 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 DGKQP52824 942 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 DSTNP60981 165 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 RPL38P63173 70 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 HPCAP84074 193 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 MS4A2Q01362 244 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 MEF2AQ02078 507 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 NAE1Q13564 534 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 CCNIQ14094 377 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PTK2BQ14289 1009 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SQLEQ14534 574 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 INPP5AQ14642 412 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PTGR1Q14914 329 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PCBP2Q15366 365 aaKnown RBP eCLIP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 LRRC36Q1X8D7 754 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 DNAL1Q4LDG9 190 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 C6orf136Q5SQH8 315 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 LDLRAP1Q5SW96 308 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SULT1C3Q6IMI6 304 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ZCCHC8Q6NZY4 707 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 TTC23LQ6PF05 361 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SUSD1Q6UWL2 747 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 XKR5Q6UX68 686 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 TRMT11Q7Z4G4 463 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 LILRB2Q8N423 598 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 IL17RCQ8NAC3 791 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SMRP1Q8NCR6 262 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 RP9Q8TA86 221 aaKnown RBP4.94□□□□□ -1.62
ATXN3-202ENST00000359366 FAM110BQ8TC76 370 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 CSGALNACT1Q8TDX6 532 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 NRG4Q8WWG1 115 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ASZ1Q8WWH4 475 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 ATL1Q8WXF7 558 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 SGCDQ92629 289 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 PPP1R16AQ96I34 528 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 MSLNLQ96KJ4 702 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 RIPOR3Q96MK2 946 aa4.94□□□□□ -1.62
ATXN3-202ENST00000359366 CCM2Q9BSQ5 444 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms