RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 TEX13DA0A0J9YY54 714 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 KERAO60938 352 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 DNAJA1P31689 397 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 ILF3Q12906 894 aaKnown RBP eCLIP10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 LCP2Q13094 533 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 CHIT1Q13231 466 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 EIPR1Q53HC9 387 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 GRHL2Q6ISB3 625 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 COMMD7Q86VX2 200 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 SPATA22Q8NHS9 363 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 AUTS2Q8WXX7 1259 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 C7orf34Q96L11 122 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 PTBP2Q9UKA9 531 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 F7P08709 466 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 SPARCP09486 303 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 RPS12P25398 132 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 SLC7A1P30825 629 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 HNRNPA0Q13151 305 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 MEP1AQ16819 746 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 PDSS2Q86YH6 399 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 SLC22A8Q8TCC7 542 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 FBXL20Q96IG2 436 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 HSFY1Q96LI6 401 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 CSPG4P5Q96PW8 444 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 HERC2P3Q9BVR0 1158 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 POLR2J3Q9H1A7 115 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 EVLQ9UI08 416 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 LGALS2P05162 132 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 RPLP2P05387 115 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 HTR2BP41595 481 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 HAS1Q92839 578 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 SFTPBP07988 381 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 ITGA5P08648 1049 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 IL7P13232 177 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 CD72P21854 359 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 NR4A2P43354 598 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 SLC13A2Q13183 592 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 XKR5Q6UX68 686 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 NIPA1Q7RTP0 329 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 SMURF2Q9HAU4 748 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 ENAMQ9NRM1 1142 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 SLC17A6Q9P2U8 582 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 TNFRSF10DQ9UBN6 386 aa10.8□□□□□ -0.68
GTF3C1-201ENST00000356183 TCHHQ07283 1943 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 MSR1P21757 451 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 ELK4P28324 431 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 MINDY4Q4G0A6 757 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 ATAT1Q5SQI0 421 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 METTL21AQ8WXB1 218 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 DPCDQ9BVM2 203 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 KCNMB3Q9NPA1 279 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 ZNF282Q9UDV7 671 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 TCAF1Q9Y4C2 921 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 COLEC10Q9Y6Z7 277 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 DIP2BQ9P265 1576 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 ILVBLA1L0T0 632 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 NPHS1O60500 1241 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 CD97P48960 835 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 NDUFA9Q16795 377 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 ZNF829Q3KNS6 432 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 CYP2U1Q7Z449 544 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 TIGD4Q8IY51 512 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 KLHL6Q8WZ60 621 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 TRMT61BQ9BVS5 477 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 KIAA1522Q9P206 1035 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 FETUBQ9UGM5 382 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 RABL2BQ9UNT1 228 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 GNRH1P01148 92 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 TGFB3P10600 412 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 CKMT2P17540 419 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 PTNP21246 168 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 SLC18A1P54219 525 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 GTF2BQ00403 316 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 PON2Q15165 354 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 CARD16Q5EG05 197 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 PSRC1Q6PGN9 363 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 AGBL3Q8NEM8 1001 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 OR10Q1Q8NGQ4 319 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 GPR151Q8TDV0 419 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 NCSTNQ92542 709 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 TCEAL4Q96EI5 215 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 PRICKLE1Q96MT3 831 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 CALML5Q9NZT1 146 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 POFUT2Q9Y2G5 429 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 H0YJX3 145 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 HCKP08631 526 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 CES1P23141 567 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 SHMT1P34896 483 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 FXYD6P3P58550 94 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 RAB5BP61020 215 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 TEX44Q53QW1 395 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 PAMR1Q6UXH9 720 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 SLC13A3Q8WWT9 602 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 FCAMRQ8WWV6 532 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 MFSD3Q96ES6 412 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 FAM84AQ96KN4 292 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 SLC35A5Q9BS91 424 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 FZD4Q9ULV1 537 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 NWD1Q149M9 1564 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms