RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 GCNT1Q02742 428 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 SLC25A52Q3SY17 297 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 FUT10Q6P4F1 479 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 PAQR7Q86WK9 346 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 PRR18Q8N4B5 295 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 SERTAD3Q9UJW9 196 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 BAZ2AQ9UIF9 1905 aaKnown RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 FXYD6-FXYD2A0A087WZ82 144 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 LIASO43766 372 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 JUNP05412 331 aaKnown RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 LEPRP48357 1165 aaKnown RBP16.9■□□□□ 0.3
COL27A1-201ENST00000356083 CACNG1Q06432 222 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 GRHL2Q6ISB3 625 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 SYCE2Q6PIF2 218 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 SPATA22Q8NHS9 363 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 FXYD6Q9H0Q3 95 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 IL25Q9H293 177 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 MAGEL2Q9UJ55 1249 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 C15orf41Q9Y2V0 281 aa16.9■□□□□ 0.3
COL27A1-201ENST00000356083 A0A1W2PRQ8 180 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 C9IYK1 514 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 PLK4O00444 970 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 BCAS1O75363 584 aaPredicted RBP16.89■□□□□ 0.3
COL27A1-201ENST00000356083 PKMP14618 531 aaKnown RBP16.89■□□□□ 0.3
COL27A1-201ENST00000356083 DGKGP49619 791 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 GJA9P57773 515 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 DCDC1P59894 354 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 GRIK5Q16478 980 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 FAM182AQ5T1J6 154 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 UNC93AQ86WB7 457 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 LAMP5Q9UJQ1 280 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 CORO1CQ9ULV4 474 aaPredicted RBP16.89■□□□□ 0.3
COL27A1-201ENST00000356083 FADS3Q9Y5Q0 445 aa16.89■□□□□ 0.3
COL27A1-201ENST00000356083 PIM1P11309 404 aaPredicted RBP16.89■□□□□ 0.29
COL27A1-201ENST00000356083 C2orf76Q3KRA6 126 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 PARP15Q460N3 678 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 UBQLNLQ8IYU4 475 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 PCDHGB7Q9Y5F8 929 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 SCN1AP35498 2009 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 NPIPA2E9PIF3 369 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 NPIPA3F8WFD2 350 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 UNC5CO95185 931 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 S100A12P80511 92 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 TATDN1Q6P1N9 297 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 OR1F2PQ96R84 312 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 GIN1Q9NXP7 522 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 BCKDHAP12694 445 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 CD83Q01151 205 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 ATAD3CQ5T2N8 411 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 SLCO1B3Q9NPD5 702 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 TVP23AA6NH52 213 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 KHKP50053 298 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 ZACNQ401N2 412 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 NUS1Q96E22 293 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 KLK1P06870 262 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 SELPP16109 830 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 INTS6LQ5JSJ4 861 aaKnown RBP16.89■□□□□ 0.29
COL27A1-201ENST00000356083 OR8K3Q8NH51 312 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 MIPEPQ99797 713 aa16.89■□□□□ 0.29
COL27A1-201ENST00000356083 CLUHO75153 1309 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 GRM2Q14416 872 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 SLC16A9Q7RTY1 509 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 ANKRD23Q86SG2 305 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 AUTS2Q8WXX7 1259 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 ESAMQ96AP7 390 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 RUVBL1Q9Y265 456 aaKnown RBP16.88■□□□□ 0.29
COL27A1-201ENST00000356083 CPQQ9Y646 472 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 FER1L6Q2WGJ9 1857 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 HTR3EA5X5Y0 456 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 LRRC66Q68CR7 880 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 GPR153Q6NV75 609 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 MFSD2AQ8NA29 543 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 NUDT15Q9NV35 164 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 HIF1ANQ9NWT6 349 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 PADI3Q9ULW8 664 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 FAM155AB1AL88 458 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-201ENST00000356083 HRGP04196 525 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 PRSS55Q6UWB4 352 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-201ENST00000356083 PYCR2Q96C36 320 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 SPATA6Q9NWH7 488 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-201ENST00000356083 AIREO43918 545 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 MMP3P08254 477 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 FMO3P31513 532 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 ARL9Q6T311 187 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 IFNL1Q8IU54 200 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 CCDC107Q8WV48 283 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 EIF2B4Q9UI10 523 aaKnown RBP16.88■□□□□ 0.29
COL27A1-201ENST00000356083 MYOCOSA0A1B0GUC4 107 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 TTC24A2A3L6 582 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-201ENST00000356083 MAGEB17A8MXT2 336 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 SERPINA6P08185 405 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 PBX3P40426 434 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 CLCNKAP51800 687 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 PPM1JQ5JR12 505 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 CHADLQ6NUI6 762 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 CASTOR1Q8WTX7 329 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 TMEM51Q9NW97 253 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 GBAP04062 536 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 RBM34P42696 430 aaKnown RBP16.88■□□□□ 0.29
COL27A1-201ENST00000356083 SGCAQ16586 387 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms