RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 C1orf105O95561 183 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 ANXA6P08133 673 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 SDC1P18827 310 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 GGT1P19440 569 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 IMPA1P29218 277 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 PDHA2P29803 388 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 OPRD1P41143 372 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 HNRNPFP52597 415 aaKnown RBP16.2■□□□□ 0.18
SAMM50-201ENST00000350028 PLIN5Q00G26 463 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 RUNX3Q13761 415 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 DOC2AQ14183 400 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 TANGO2Q6ICL3 276 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 CFAP206Q8IYR0 622 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 CLHC1Q8NHS4 586 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 WDR20Q8TBZ3 569 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 FAM110BQ8TC76 370 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 CXorf40AQ8TE69 158 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 ITCHQ96J02 903 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 CNBD2Q96M20 576 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 THUMPD3Q9BV44 507 aaKnown RBP16.2■□□□□ 0.18
SAMM50-201ENST00000350028 HDAC8Q9BY41 377 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 OR2AG1Q9H205 316 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 PIF1Q9H611 641 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 GEMIN8Q9NWZ8 242 aaKnown RBP16.2■□□□□ 0.18
SAMM50-201ENST00000350028 GPRC5BQ9NZH0 403 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 THAP10Q9P2Z0 257 aaPredicted RBP16.2■□□□□ 0.18
SAMM50-201ENST00000350028 YBX2Q9Y2T7 364 aaKnown RBP16.2■□□□□ 0.18
SAMM50-201ENST00000350028 REV3LO60673 3130 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 TRBV5-3A0A0A0MS03 114 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 PRMT3O60678 531 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 FAM58BPP0C7Q3 252 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 CDH1P12830 882 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 CKMT2P17540 419 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 PSMC3P17980 439 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 CD22P20273 847 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 PNLIPRP1P54315 467 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 TXNL4AP83876 142 aaKnown RBP16.19■□□□□ 0.18
SAMM50-201ENST00000350028 CCSMST1Q4G0I0 132 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 LRIF1Q5T3J3 769 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 ATG9BQ674R7 924 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 NOXRED1Q6NXP6 359 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 VITQ6UXI7 678 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 MMAAQ8IVH4 418 aaKnown RBP16.19■□□□□ 0.18
SAMM50-201ENST00000350028 MFSD2AQ8NA29 543 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 OR2T12Q8NG77 320 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 MED8Q96G25 268 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 APOLD1Q96LR9 279 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 TSSK3Q96PN8 268 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 TRAPPC9Q96Q05 1148 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 PAIP1Q9H074 479 aaKnown RBP16.19■□□□□ 0.18
SAMM50-201ENST00000350028 GORASP2Q9H8Y8 452 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 PRSS16Q9NQE7 514 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 VPS29Q9UBQ0 182 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 GPR34Q9UPC5 381 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 PCDHGA11Q9Y5H2 935 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 E7EQ34 232 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 PLK4O00444 970 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 SLC16A8O95907 504 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 IL12RB1P42701 662 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 CCT8P50990 548 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 POLE2P56282 527 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 FCHO2Q0JRZ9 810 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 ATP6AP1Q15904 470 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 TMTC4Q5T4D3 741 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 FAM46CQ5VWP2 391 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 TRIM74Q86UV6 250 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 TRAPPC5Q8IUR0 188 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 MSRB3Q8IXL7 192 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 RIMKLAQ8IXN7 391 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 YAF2Q8IY57 180 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 DTWD1Q8N5C7 304 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 HHIPQ96QV1 700 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 OR4K3Q96R72 315 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 BRF2Q9HAW0 419 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 SPATA6Q9NWH7 488 aaPredicted RBP16.19■□□□□ 0.18
SAMM50-201ENST00000350028 SLC25A37Q9NYZ2 338 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 ATXN10Q9UBB4 475 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 GULP1Q9UBP9 304 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 CDH7Q9ULB5 785 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 RUVBL1Q9Y265 456 aaKnown RBP16.19■□□□□ 0.18
SAMM50-201ENST00000350028 KCNE2Q9Y6J6 123 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 AK5Q9Y6K8 562 aa16.19■□□□□ 0.18
SAMM50-201ENST00000350028 SAC3D1A6NKF1 404 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 K7ESM1 405 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 SOCS2O14508 198 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 GSTA4O15217 222 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 TPST1O60507 370 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 TNFAIP8O95379 198 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 C7P10643 843 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 PRPS1L1P21108 318 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 TACR1P25103 407 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 GJA4P35212 333 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 PBX2P40425 430 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 EIF2DP41214 584 aaKnown RBP16.18■□□□□ 0.18
SAMM50-201ENST00000350028 PHC1P78364 1004 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 E2F2Q14209 437 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 DPY19L1Q2PZI1 675 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 PLA2G4EQ3MJ16 856 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 SPRED1Q7Z699 444 aa16.18■□□□□ 0.18
SAMM50-201ENST00000350028 GPR180Q86V85 440 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms