RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 MIPEPQ99797 713 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 ATP13A2Q9NQ11 1180 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 NXT1Q9UKK6 140 aaKnown RBP11.92□□□□□ -0.5
SGCA-202ENST00000344627 KRT87PA6NCN2 255 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 ENO4A6NNW6 628 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 H3BMH7 237 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 ESR1P03372 595 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 MCM3P25205 808 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 ARNTP27540 789 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 CCNFP41002 786 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 GABRA4P48169 554 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 AIMP2Q13155 320 aaKnown RBP11.91□□□□□ -0.5
SGCA-202ENST00000344627 DHX34Q14147 1143 aaKnown RBP11.91□□□□□ -0.5
SGCA-202ENST00000344627 KCNJ11Q14654 390 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 CYP2A13Q16696 494 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 CCSMST1Q4G0I0 132 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 CTSL3PQ5NE16 218 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 NEPROQ6NW34 567 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 MRPL14Q6P1L8 145 aaKnown RBP11.91□□□□□ -0.5
SGCA-202ENST00000344627 TTC27Q6P3X3 843 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 MAMDC2Q7Z304 686 aaPredicted RBP11.91□□□□□ -0.5
SGCA-202ENST00000344627 SLC34A3Q8N130 599 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 TTC29Q8NA56 475 aaPredicted RBP11.91□□□□□ -0.5
SGCA-202ENST00000344627 ZNF669Q96BR6 464 aaPredicted RBP11.91□□□□□ -0.5
SGCA-202ENST00000344627 GBP5Q96PP8 586 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 TCF12Q99081 682 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 SELENOSQ9BQE4 189 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 CCDC68Q9H2F9 335 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 WDR54Q9H977 334 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 SLC5A6Q9Y289 635 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 JRKLQ9Y4A0 524 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 MAD1L1Q9Y6D9 718 aa11.91□□□□□ -0.5
SGCA-202ENST00000344627 USP9YO00507 2555 aaPredicted RBP11.91□□□□□ -0.5
SGCA-202ENST00000344627 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 MAGEB16A2A368 324 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 SDR42E2A6NKP2 422 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 CBX6O95503 412 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 PKMP14618 531 aaKnown RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 PSMB5P28074 263 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 COILP38432 576 aaPredicted RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 FOXL2P58012 376 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 VSX2P58304 361 aaPredicted RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 GRB7Q14451 532 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 GRM7Q14831 915 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 NAA25Q14CX7 972 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 ANKRD20A4Q4UJ75 823 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 ACSBG2Q5FVE4 666 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 TCTE1Q5JU00 501 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 IRAK1BP1Q5VVH5 260 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 FCRL6Q6DN72 434 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 ZNF470Q6ECI4 717 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 KIAA0930Q6ICG6 404 aaPredicted RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 CCDC137Q6PK04 289 aaKnown RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 Q6ZS92 163 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 CAND1Q86VP6 1230 aaKnown RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 METTL27Q8N6F8 245 aaPredicted RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 LPGAT1Q92604 370 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 C5orf34Q96MH7 638 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 BIRC8Q96P09 236 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 BARD1Q99728 777 aaKnown RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 TRIM56Q9BRZ2 755 aaKnown RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 MENTQ9BUN1 341 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 ACAT2Q9BWD1 397 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 ILKAPQ9H0C8 392 aaPredicted RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 ABCF3Q9NUQ8 709 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 P4HTMQ9NXG6 502 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 LUZP4Q9P127 313 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 GALPQ9UBC7 116 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 COPG1Q9Y678 874 aaKnown RBP11.9□□□□□ -0.5
SGCA-202ENST00000344627 FAM169AQ9Y6X4 670 aa11.9□□□□□ -0.5
SGCA-202ENST00000344627 MDC1Q14676 2089 aaKnown RBP11.9□□□□□ -0.51
SGCA-202ENST00000344627 A0A0J9YVX5 310 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 GOLGA6L10A0A0M3HER8 536 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 AGPSO00116 658 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 PGRMC1O00264 195 aaKnown RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 PCDH17O14917 1159 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 ABCB7O75027 752 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 CATP04040 527 aaKnown RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 EIF2S1P05198 315 aaKnown RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 F7P08709 466 aaPredicted RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 ERVK-10P10266 1014 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 OGNP20774 298 aaKnown RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 MMP11P24347 488 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 CMPK1P30085 196 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 RPA3P35244 121 aaPredicted RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 PER3P56645 1201 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 CTBP1Q13363 440 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 FASTKQ14296 549 aaKnown RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 PPP1R7Q15435 360 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 TYSND1Q2T9J0 566 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 KLHL38Q2WGJ6 581 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 FAM214AQ32MH5 1076 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 WASHC2DQ5SRD0 308 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 B3GNTL1Q67FW5 361 aaPredicted RBP11.89□□□□□ -0.51
SGCA-202ENST00000344627 CILP2Q8IUL8 1156 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 OR9A1PQ8NGU1 263 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 PRR7Q8TB68 274 aa11.89□□□□□ -0.51
SGCA-202ENST00000344627 PPP4R1Q8TF05 950 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms