RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 GATAD2AQ86YP4 633 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 RAB43Q86YS6 212 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 TMEM132CQ8N3T6 1108 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 KRTCAP2Q8N6L1 136 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 C3orf58Q8NDZ4 430 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 SCAMP5Q8TAC9 235 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 ZNF675Q8TD23 568 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 GGHQ92820 318 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 ZFP42Q96MM3 310 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 Q96MT0 163 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 SERPINB11Q96P15 392 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 COL21A1Q96P44 957 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 HHIPQ96QV1 700 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 SLC30A2Q9BRI3 323 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 CENPOQ9BU64 300 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
HOXA1-201ENST00000343060 ASAH2Q9NR71 780 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 KIF17Q9P2E2 1029 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 CACNG4Q9UBN1 327 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 BTBD3Q9Y2F9 522 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 COMMD10Q9Y6G5 202 aa9.42□□□□□ -0.9
HOXA1-201ENST00000343060 ERVH48-1M5A8F1 160 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 TLL1O43897 1013 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 GJB3O75712 270 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 SLITRK5O94991 958 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 CRYZL1O95825 349 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 MOCS2O96007 188 aaPredicted RBP9.41□□□□□ -0.9
HOXA1-201ENST00000343060 YES1P07947 543 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 CA5AP35218 305 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 SOX6P35712 828 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ADCYAP1R1P41586 468 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 RGS6P49758 472 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 OLR1P78380 273 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 VLDLRP98155 873 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 IL1RL1Q01638 556 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 EIF4HQ15056 248 aaKnown RBP9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ZNF792Q3KQV3 632 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ALFQ53S48 1182 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 MSANTD1Q6ZTZ1 278 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ARMCX6Q7L4S7 300 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ZNF367Q7RTV3 350 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 GPR155Q7Z3F1 870 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 SERPINA11Q86U17 422 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 C11orf74Q86VG3 221 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 HORMAD1Q86X24 394 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ZSWIM9Q86XI8 627 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 LIX1LQ8IVB5 337 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 P3H2Q8IVL5 708 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ST13P5Q8NFI4 369 aaPredicted RBP9.41□□□□□ -0.9
HOXA1-201ENST00000343060 CHTF18Q8WVB6 975 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 JPH3Q8WXH2 748 aaPredicted RBP9.41□□□□□ -0.9
HOXA1-201ENST00000343060 PHOX2BQ99453 314 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 EPYCQ99645 322 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ACBD6Q9BR61 282 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 RNF167Q9H6Y7 350 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ACOXLQ9NUZ1 547 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 TMLHEQ9NVH6 421 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 SPASTQ9UBP0 616 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 TMA7Q9Y2S6 64 aaKnown RBP9.41□□□□□ -0.9
HOXA1-201ENST00000343060 SAMHD1Q9Y3Z3 626 aaKnown RBP9.41□□□□□ -0.9
HOXA1-201ENST00000343060 PLXNA3P51805 1871 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 LOC105371267A0A1B0GV96 52 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 MYO1GB0I1T2 1018 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 TNFRSF10BO14763 440 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 AOC2O75106 756 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 C9P02748 559 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 MYCLP1P12525 358 aaPredicted RBP9.41□□□□□ -0.9
HOXA1-201ENST00000343060 HNF4AP41235 474 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 GNPDA1P46926 289 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 SERINC3Q13530 473 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 TBRG1Q3YBR2 411 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 SOWAHCQ53LP3 525 aaPredicted RBP9.41□□□□□ -0.9
HOXA1-201ENST00000343060 SBSNQ6UWP8 590 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ADAMTSL2Q86TH1 951 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 NOXA1Q86UR1 476 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 CYP4Z2PQ8N1L4 340 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 TCAIMQ8N3R3 496 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 ATG16L2Q8NAA4 619 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 OR10Q1Q8NGQ4 319 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 SLC7A6Q92536 515 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 CLIP3Q96DZ5 547 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 CRELD1Q96HD1 420 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 NEDD4LQ96PU5 975 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 MYOCQ99972 504 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 LRTM1Q9HBL6 345 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 PLSCR3Q9NRY6 295 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 THUMPD1Q9NXG2 353 aaKnown RBP9.41□□□□□ -0.9
HOXA1-201ENST00000343060 RPS6KA6Q9UK32 745 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 TLR6Q9Y2C9 796 aa9.41□□□□□ -0.9
HOXA1-201ENST00000343060 LOC100506127A0A0U1RQW1 187 aa9.4□□□□□ -0.9
HOXA1-201ENST00000343060 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.4□□□□□ -0.9
HOXA1-201ENST00000343060 SLC35F4A4IF30 521 aa9.4□□□□□ -0.9
HOXA1-201ENST00000343060 PLK4O00444 970 aa9.4□□□□□ -0.9
HOXA1-201ENST00000343060 PRAMEF11O60813 436 aa9.4□□□□□ -0.9
HOXA1-201ENST00000343060 ARHGEF15O94989 841 aa9.4□□□□□ -0.9
HOXA1-201ENST00000343060 ZNF682O95780 498 aa9.4□□□□□ -0.9
HOXA1-201ENST00000343060 GLUD1P00367 558 aa9.4□□□□□ -0.9
HOXA1-201ENST00000343060 PTHP01270 115 aa9.4□□□□□ -0.9
HOXA1-201ENST00000343060 PIRTP0C851 137 aa9.4□□□□□ -0.9
HOXA1-201ENST00000343060 GABRB1P18505 474 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms