RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TAP2Q03519 686 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 TRA2AQ13595 282 aaKnown RBP eCLIP12.73□□□□□ -0.37
TUBD1-202ENST00000340993 KIR2DS3Q14952 304 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 CYP2A13Q16696 494 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 PPP1R3AQ16821 1122 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 ADGRD1Q6QNK2 874 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 UNQ6494/PRO21346Q6UXR6 183 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 PRSS42Q7Z5A4 293 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 GPSM1Q86YR5 675 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 PLD3Q8IV08 490 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 SMPDL3AQ92484 453 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 N4BP2L2Q92802 583 aaPredicted RBP12.73□□□□□ -0.37
TUBD1-202ENST00000340993 GATA6Q92908 595 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 CAVIN3Q969G5 261 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 CCDC138Q96M89 665 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 DCBLD2Q96PD2 775 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 CCDC177Q9NQR7 707 aaPredicted RBP12.73□□□□□ -0.37
TUBD1-202ENST00000340993 CUEDC1Q9NWM3 386 aaPredicted RBP12.73□□□□□ -0.37
TUBD1-202ENST00000340993 CD274Q9NZQ7 290 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 A0A087X1B8 175 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 IQANK1A0A1B0GTG1 560 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 TMEM150CB9EJG8 249 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 C9orf172C9J069 976 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 TMX2-CTNND1H3BSU7 103 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 HGSO14964 777 aaPredicted RBP12.72□□□□□ -0.37
TUBD1-202ENST00000340993 TIAF1O95411 115 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 ZBTB11O95625 1053 aaPredicted RBP12.72□□□□□ -0.37
TUBD1-202ENST00000340993 NELFEP18615 380 aaKnown RBP12.72□□□□□ -0.37
TUBD1-202ENST00000340993 HSD11B2P80365 405 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 SHC2P98077 582 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 ZXDCQ2QGD7 858 aaPredicted RBP12.72□□□□□ -0.37
TUBD1-202ENST00000340993 C16orf46Q6P387 395 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 CDHR3Q6ZTQ4 885 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 ADAMTSL2Q86TH1 951 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 RASGRP3Q8IV61 690 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 OR2L3Q8NG85 312 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.72□□□□□ -0.37
TUBD1-202ENST00000340993 RAB33BQ9H082 229 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 CENPHQ9H3R5 247 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 SLC6A20Q9NP91 592 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 MRPS30Q9NP92 439 aaKnown RBP12.72□□□□□ -0.37
TUBD1-202ENST00000340993 ACSS2Q9NR19 701 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 C1GALT1Q9NS00 363 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 STARD5Q9NSY2 213 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 WWOXQ9NZC7 414 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 CPSF2Q9P2I0 782 aaKnown RBP12.72□□□□□ -0.37
TUBD1-202ENST00000340993 PDP2Q9P2J9 529 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 ZNF180Q9UJW8 692 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 OARD1Q9Y530 152 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 DSPP15924 2871 aaKnown RBP12.72□□□□□ -0.37
TUBD1-202ENST00000340993 SCN3AQ9NY46 2000 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 SEC16AO15027 2179 aa12.72□□□□□ -0.37
TUBD1-202ENST00000340993 MATN2O00339 956 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 POLR1CO15160 346 aaPredicted RBP12.71□□□□□ -0.37
TUBD1-202ENST00000340993 SLC16A5O15375 505 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 PYGBP11216 843 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 SLC5A2P31639 672 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 HSPA7P48741 367 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 MEF2AQ02078 507 aaPredicted RBP12.71□□□□□ -0.37
TUBD1-202ENST00000340993 TGFBIQ15582 683 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 CLPPQ16740 277 aaPredicted RBP12.71□□□□□ -0.37
TUBD1-202ENST00000340993 PRAMEF13Q5VWM6 474 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 ZFAND4Q86XD8 727 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 C4orf33Q8N1A6 199 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 OR2A1Q8NGT9 310 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 PDLIM5Q96HC4 596 aaKnown RBP12.71□□□□□ -0.37
TUBD1-202ENST00000340993 UBXN10Q96LJ8 280 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 SLC46A1Q96NT5 459 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 DPH7Q9BTV6 452 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 C12orf65Q9H3J6 166 aaKnown RBP12.71□□□□□ -0.37
TUBD1-202ENST00000340993 CCDC86Q9H6F5 360 aaKnown RBP12.71□□□□□ -0.37
TUBD1-202ENST00000340993 NMRAL1Q9HBL8 299 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 PDE7BQ9NP56 450 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 ASB1Q9Y576 335 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 PCDHB11Q9Y5F2 797 aa12.71□□□□□ -0.37
TUBD1-202ENST00000340993 A0A0J9YVX5 310 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 LRRC14BA6NHZ5 514 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 RFPL1O75677 317 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 WDR47O94967 919 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 MT-ND3P03897 115 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 S100BP04271 92 aaPredicted RBP12.71□□□□□ -0.38
TUBD1-202ENST00000340993 EIF2S1P05198 315 aaKnown RBP12.71□□□□□ -0.38
TUBD1-202ENST00000340993 ANXA5P08758 320 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 ANKRD34CP0C6C1 535 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 ERGP11308 486 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 CDH1P12830 882 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 ZNF28P17035 718 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 AGTR2P50052 363 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 ATP6V0D1P61421 351 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 FAM83EQ2M2I3 478 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 LGSNQ5TDP6 509 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 ICE2Q659A1 982 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 FCRL6Q6DN72 434 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 FIGLAQ6QHK4 219 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 ISCA2Q86U28 154 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 BMPERQ8N8U9 685 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 FBXO15Q8NCQ5 510 aaPredicted RBP12.71□□□□□ -0.38
TUBD1-202ENST00000340993 ZCCHC14Q8WYQ9 949 aaKnown RBP12.71□□□□□ -0.38
TUBD1-202ENST00000340993 KLHL6Q8WZ60 621 aa12.71□□□□□ -0.38
TUBD1-202ENST00000340993 KIAA1191Q96A73 305 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms