RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 KRT6AP02538 564 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 KRT6BP04259 564 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 ATP6V1C1P21283 382 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 IGFBP4P22692 258 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 ACADLP28330 430 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 CTHP32929 405 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 KRT6CP48668 564 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 GSK3BP49841 420 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 GTF2A1P52655 376 aaPredicted RBP7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 OR4D2P58180 307 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 SP140Q13342 867 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 HTR4Q13639 388 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 GRAMD1BQ3KR37 738 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 SAMD4BQ5PRF9 694 aaKnown RBP7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 ANO7Q6IWH7 933 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 HACD2Q6Y1H2 254 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 NEK10Q6ZWH5 1172 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 CHST15Q7LFX5 561 aaPredicted RBP7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 DSG4Q86SJ6 1040 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 TDHQ8IZJ6 230 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 FRMD1Q8N878 549 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 JADE3Q92613 823 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 COX14Q96I36 57 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 MSLNLQ96KJ4 702 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 PPP3R2Q96LZ3 170 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 CCT7Q99832 543 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 ECSITQ9BQ95 431 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 SUCOQ9UBS9 1254 aaKnown RBP7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 RIMS3Q9UJD0 308 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 PPT2Q9UMR5 302 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 TDRKHQ9Y2W6 561 aaKnown RBP7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 WDFY3Q8IZQ1 3526 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 PRSS51A0A1B0GVH4 220 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 FAM149AA5PLN7 773 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 PABPN1LA6NDY0 278 aaKnown RBP7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 POM121CA8CG34 1229 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 BBIP1A8MTZ0 92 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 H0Y8X5 98 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC28A1O00337 649 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC16A5O15375 505 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 YY2O15391 372 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 TIPRLO75663 272 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 CATP04040 527 aaKnown RBP7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 SDC1P18827 310 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 TBPL1P62380 186 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 TAP2Q03519 686 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 LIPEQ05469 1076 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 IRF4Q15306 451 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 TMPRSS11BQ86T26 416 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 DHFR2Q86XF0 187 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 FAM20CQ8IXL6 584 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 MSRB3Q8IXL7 192 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 PHACTR4Q8IZ21 702 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 GALNT4Q8N4A0 578 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 GPR156Q8NFN8 814 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 OR2L2Q8NH16 312 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 CDC26Q8NHZ8 85 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 WDR20Q8TBZ3 569 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 GTF2H4Q92759 462 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 CCDC138Q96M89 665 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 INPP5KQ9BT40 448 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 DPY30Q9C005 99 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 OR52A5Q9H2C5 316 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 TTYH1Q9H313 450 aaPredicted RBP7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC25A37Q9NYZ2 338 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 ASF1AQ9Y294 204 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 BTBD3Q9Y2F9 522 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 PCM1Q15154 2024 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 A0A1W2PQU0 124 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 KANSL1LA0AUZ9 987 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 NARSO43776 548 aaKnown RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 KLF8O95600 359 aaPredicted RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 PGRP06401 933 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 PCNAP12004 261 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 JUPP14923 745 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 JAK1P23458 1154 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 PSMB5P28074 263 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 EIF2DP41214 584 aaKnown RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 CLDN2P57739 230 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 PPP2CBP62714 309 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 PPP2CAP67775 309 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 RHDQ02161 417 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 GRIK2Q13002 908 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 CKAP5Q14008 2032 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 GK3PQ14409 553 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 SKIV2LQ15477 1246 aaKnown RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 BCL7AQ4VC05 210 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 CDKL4Q5MAI5 379 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 FAM46CQ5VWP2 391 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 HMBOX1Q6NT76 420 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 FAM180BQ6P0A1 224 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 AMZ2Q86W34 360 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 TMEM102Q8N9M5 508 aaPredicted RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 SMRP1Q8NCR6 262 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 OR7G3Q8NG95 312 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 OR7A2PQ8NGA2 310 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 OR56A3Q8NH54 315 aa7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 RSRC1Q96IZ7 334 aaKnown RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 HOPXQ9BPY8 73 aaPredicted RBP7.16□□□□□ -1.26
SRFBP1-201ENST00000339397 REPIN1Q9BWE0 567 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms