RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 FGF2P09038 288 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 FGF3P11487 239 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SFNP31947 248 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 MMP12P39900 470 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 RFX5P48382 616 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 NRIP1P48552 1158 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ARPP19P56211 112 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 DEFA5Q01523 94 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GRB14Q14449 540 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PRPSAP1Q14558 356 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 EIF4HQ15056 248 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ZYXQ15942 572 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ETFDHQ16134 617 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ODR4Q5SWX8 454 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SH3PXD2AQ5TCZ1 1133 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GLYATQ6IB77 296 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CHADLQ6NUI6 762 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 KLHL24Q6TFL4 600 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ARMC10Q8N2F6 343 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 UXS1Q8NBZ7 420 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 MOSPD2Q8NHP6 518 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PHOSPHO2Q8TCD6 241 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 RAET1EQ8TD07 263 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 TMEM143Q96AN5 459 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SCRN2Q96FV2 425 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF577Q9BSK1 485 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 TRIM54Q9BYV2 358 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SPACA1Q9HBV2 294 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 XPNPEP1Q9NQW7 623 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 LATS2Q9NRM7 1088 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PCDHB10Q9UN67 800 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 TP53TG5Q9Y2B4 290 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PCDHB9Q9Y5E1 797 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 DEPDC5O75140 1603 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 TCRBV9S1A1TA0A576 114 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ITGB1BP1O14713 200 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 BCKDKO14874 412 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 RP2O75695 350 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GLUD1P00367 558 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CD2P06729 351 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 FGFR1P11362 822 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 TSPAN8P19075 237 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 HK1P19367 917 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 DNASE1P24855 282 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GDI1P31150 447 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GRIA4P48058 902 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 NAE1Q13564 534 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 REP15Q6BDI9 236 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 RAET1GQ6H3X3 334 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 DDX53Q86TM3 631 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 TSPAN33Q86UF1 283 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ZBTB46Q86UZ6 589 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 C15orf54Q8N8G6 183 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 DUSP18Q8NEJ0 188 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 OR6X1Q8NH79 312 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SLC5A5Q92911 643 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 HDHD2Q9H0R4 259 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ANKRA2Q9H9E1 313 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GLRX2Q9NS18 164 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PCDHA6Q9UN73 950 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CCDC61Q9Y6R9 512 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 LOC100506127A0A0U1RQW1 187 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 B4DXG7 233 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 DISC1C4P0D8 188 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 DNASE2O00115 360 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PRMT5O14744 637 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 NRP2O60462 931 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SCELO95171 688 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PLATP00750 562 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ADAP00813 363 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SERPINA3P01011 423 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 DAOP14920 347 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 NFKB1P19838 968 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CAPN3P20807 821 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ITGB8P26012 769 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ACADLP28330 430 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CCR7P32248 378 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 GGT5P36269 586 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ELK3P41970 407 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ASPAP45381 313 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CRKP46108 304 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 OMPP47874 163 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF81P51508 661 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CLDN20P56880 219 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CARD18P57730 90 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 RPS7P62081 194 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CD47Q08722 323 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 FASTKQ14296 549 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 SMAD2Q15796 467 aaKnown RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 FAM199XQ6PEV8 388 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-201ENST00000338963 METTL23Q86XA0 190 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 NIM1KQ8IY84 436 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CFAP206Q8IYR0 622 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 FAM181AQ8N9Y4 354 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 POF1BQ8WVV4 589 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 KCNJ9Q92806 393 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 C3orf49Q96BT1 292 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 OR52B2Q96RD2 323 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CSF3RQ99062 836 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 TSNAXQ99598 290 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms