RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SLITRK5O94991 958 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 HNRNPCL4P0DMR1 293 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 C7P10643 843 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 ELNP15502 786 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 CCR4P51679 360 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 NAE1Q13564 534 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 LYSMD2Q8IV50 215 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 MAGEB10Q96LZ2 347 aaPredicted RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 FAIM2Q9BWQ8 316 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 FAM83DQ9H4H8 585 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 FARSBQ9NSD9 589 aaKnown RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 FAM118AQ9NWS6 357 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 AASSQ9UDR5 926 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 A0A1B0GVM2 712 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 INSIG1O15503 277 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 ORC5O43913 435 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 NUDT6P53370 316 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 IL10RBQ08334 325 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 SMARCB1Q12824 385 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 GPAT3Q53EU6 434 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 C1orf220Q5T0J3 134 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 ANXA8L1Q5VT79 327 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 ZNF767PQ75MW2 155 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 CXorf40AQ8TE69 158 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 RIT1Q92963 219 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 TMEM181Q9P2C4 612 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 CFL2Q9Y281 166 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 GRIP1Q9Y3R0 1128 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 MAU2Q9Y6X3 613 aa15.71■□□□□ 0.1
NPHP3-201ENST00000337331 BAZ2AQ9UIF9 1905 aaKnown RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 NME4O00746 187 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 PLATP00750 562 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 ELFN1P0C7U0 828 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 NR2F6P10588 404 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 UBL4AP11441 157 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 CRHBPP24387 322 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 BTN1A1Q13410 526 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 RGMBQ6NW40 437 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 DEF8Q6ZN54 512 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 NRARPQ7Z6K4 114 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 UPF1Q92900 1129 aaKnown RBP eCLIP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 PPP1R16AQ96I34 528 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 BCO2Q9BYV7 579 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 KIAA1522Q9P206 1035 aaPredicted RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 CFAP97Q9P2B7 532 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 EIF3KQ9UBQ5 218 aaKnown RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 PFDN2Q9UHV9 154 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 DNMT3AQ9Y6K1 912 aaPredicted RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 MEIOCA2RUB1 952 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 GRID2O43424 1007 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 DUSP11O75319 330 aaKnown RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 CLDN9O95484 217 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 POLR2CP19387 275 aaPredicted RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 SMIM11AP58511 58 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 DBPQ10586 325 aaPredicted RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 RPA4Q13156 261 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 VARS2Q5ST30 1063 aaKnown RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 RBM20Q5T481 1227 aaKnown RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 TMPRSS11BQ86T26 416 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 OR13C4Q8NGS5 318 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 SGK2Q9HBY8 427 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 AGAP5A6NIR3 686 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 STBD1O95210 358 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 TBX18O95935 607 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 DHFRP00374 187 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 IFNA7P01567 189 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 JUNP05412 331 aaKnown RBP15.7■□□□□ 0.1
NPHP3-201ENST00000337331 PROZP22891 400 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 UGT2B15P54855 530 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 DEFA5Q01523 94 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 CACNG1Q06432 222 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 ARHGAP1Q07960 439 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 NIPAL4Q0D2K0 466 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 IL18Q14116 193 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 GPR153Q6NV75 609 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 PTCHD4Q6ZW05 846 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 KIF18BQ86Y91 864 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 LSMEM1Q8N8F7 131 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 SLC37A3Q8NCC5 494 aa15.7■□□□□ 0.1
NPHP3-201ENST00000337331 TUBGCP6Q96RT7 1819 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 SEC14L2O76054 403 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 AHSGP02765 367 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 SHMT2P34897 504 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 FAM174BQ3ZCQ3 159 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 CYBRD1Q53TN4 286 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 DDI2Q5TDH0 399 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 PNCKQ6P2M8 343 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 SLC34A3Q8N130 599 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 ZBTB2Q8N680 514 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 MYRFLQ96LU7 910 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 PEBP4Q96S96 227 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 ZBTB20Q9HC78 741 aaPredicted RBP15.69■□□□□ 0.1
NPHP3-201ENST00000337331 ANKHQ9HCJ1 492 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 NKIRAS2Q9NYR9 191 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 ZFP37Q9Y6Q3 630 aaPredicted RBP15.69■□□□□ 0.1
NPHP3-201ENST00000337331 TP53P04637 393 aaPredicted RBP15.69■□□□□ 0.1
NPHP3-201ENST00000337331 KCNA5P22460 613 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 EVI2BP34910 448 aa15.69■□□□□ 0.1
NPHP3-201ENST00000337331 SCNN1AP37088 669 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms