RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 KDM1AO60341 852 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 PRAMEF4O60810 478 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 NPPBP16860 134 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 PSMB5P28074 263 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 PRDX3P30048 256 aaKnown RBP20.79■□□□□ 0.92
TPM1-204ENST00000334895 SERPINB5P36952 375 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 LCP2Q13094 533 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 TSTA3Q13630 321 aaPredicted RBP20.79■□□□□ 0.92
TPM1-204ENST00000334895 PRAMEF9Q5VWM5 478 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 FAM47EQ6ZV65 393 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 EID2Q8N6I1 236 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 APOLD1Q96LR9 279 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 TRMOQ9BU70 441 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 NOL11Q9H8H0 719 aaKnown RBP20.79■□□□□ 0.92
TPM1-204ENST00000334895 UCK1Q9HA47 277 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 BTBD3Q9Y2F9 522 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 PCM1Q15154 2024 aa20.79■□□□□ 0.92
TPM1-204ENST00000334895 ZNF839A8K0R7 811 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 SHOX2O60902 331 aaPredicted RBP20.78■□□□□ 0.92
TPM1-204ENST00000334895 CHRM5P08912 532 aaPredicted RBP20.78■□□□□ 0.92
TPM1-204ENST00000334895 ALPPL2P10696 532 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 EPB42P16452 691 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 NAA20P61599 178 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 YBX1P67809 324 aaKnown RBP20.78■□□□□ 0.92
TPM1-204ENST00000334895 SNX31Q8N9S9 440 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 FAM181AQ8N9Y4 354 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 STN1Q9H668 368 aaKnown RBP20.78■□□□□ 0.92
TPM1-204ENST00000334895 IPPKQ9H8X2 491 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 LILRA5A6NI73 299 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 HSPA4LO95757 839 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 MPSTP25325 297 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 SEC24CP53992 1094 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 SH3BP2P78314 561 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 GALNT1Q10472 559 aaPredicted RBP20.78■□□□□ 0.92
TPM1-204ENST00000334895 CDC16Q13042 620 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 TRAF3Q13114 568 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 PRAMEF13Q5VWM6 474 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 DBX2Q6ZNG2 339 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 ZNF438Q7Z4V0 828 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 KIAA2013Q8IYS2 634 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 LRRC34Q8IZ02 419 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 DCBLD1Q8N8Z6 715 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 FLVCR1-AS1Q8TAF5 88 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 AGAP11Q8TF27 550 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 C7orf26Q96N11 449 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 LRIT1Q9P2V4 623 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 TAC3Q9UHF0 121 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 ANGPTL3Q9Y5C1 460 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 PCDHGB2Q9Y5G2 931 aa20.78■□□□□ 0.92
TPM1-204ENST00000334895 ASCC3Q8N3C0 2202 aaKnown RBP20.78■□□□□ 0.92
TPM1-204ENST00000334895 SNRNP200O75643 2136 aaKnown RBP20.78■□□□□ 0.92
TPM1-204ENST00000334895 CFAP54Q96N23 3096 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 FAM221BA6H8Z2 402 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 OR6C74A6NCV1 312 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 NUDT21O43809 227 aaKnown RBP20.77■□□□□ 0.92
TPM1-204ENST00000334895 EDF1O60869 148 aaKnown RBP20.77■□□□□ 0.92
TPM1-204ENST00000334895 CCND1P24385 295 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 PIK3CGP48736 1102 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 RBBP7Q16576 425 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 LCTLQ6UWM7 567 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 SYVN1Q86TM6 617 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 CUZD1Q86UP6 607 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 ZNF781Q8N8C0 355 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 OR2A1Q8NGT9 310 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 RSC1A1Q92681 617 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 SH3KBP1Q96B97 665 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 CDK15Q96Q40 435 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 ZNF382Q96SR6 550 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 SLC38A3Q99624 504 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 ACAT2Q9BWD1 397 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 FGFR1OP2Q9NVK5 253 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 HAO1Q9UJM8 370 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 PADI4Q9UM07 663 aa20.77■□□□□ 0.92
TPM1-204ENST00000334895 MLYCDO95822 493 aa20.76■□□□□ 0.91
TPM1-204ENST00000334895 GLB1P16278 677 aa20.76■□□□□ 0.91
TPM1-204ENST00000334895 SETD7Q8WTS6 366 aaKnown RBP20.76■□□□□ 0.91
TPM1-204ENST00000334895 NEIL2Q969S2 332 aa20.76■□□□□ 0.91
TPM1-204ENST00000334895 MIPEPQ99797 713 aa20.76■□□□□ 0.91
TPM1-204ENST00000334895 EDEM2Q9BV94 578 aa20.76■□□□□ 0.91
TPM1-204ENST00000334895 MID1IP1Q9NPA3 183 aa20.76■□□□□ 0.91
TPM1-204ENST00000334895 ZDHHC2Q9UIJ5 367 aa20.76■□□□□ 0.91
TPM1-204ENST00000334895 ASXL3Q9C0F0 2248 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 RHPN2P1A8MT19 583 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 E7EQ34 232 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 GDF9O60383 454 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 VIMP08670 466 aaKnown RBP20.75■□□□□ 0.91
TPM1-204ENST00000334895 POLR2CP19387 275 aaPredicted RBP20.75■□□□□ 0.91
TPM1-204ENST00000334895 ERVPABLB-1P60509 514 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 BIRC2Q13490 618 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 NR1D2Q14995 579 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 PROX2Q3B8N5 592 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 AASDHQ4L235 1098 aaPredicted RBP20.75■□□□□ 0.91
TPM1-204ENST00000334895 THEMIS2Q5TEJ8 643 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 LETMD1Q6P1Q0 360 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 OR10G6Q8NH81 332 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 CHMP6Q96FZ7 201 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 PRR11Q96HE9 360 aaPredicted RBP20.75■□□□□ 0.91
TPM1-204ENST00000334895 NTMT1Q9BV86 223 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.75■□□□□ 0.91
TPM1-204ENST00000334895 PNPOQ9NVS9 261 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms