RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CPEB1Q9BZB8 566 aaKnown RBP11.52□□□□□ -0.57
HDAC6-201ENST00000334136 ZDHHC3Q9NYG2 299 aa11.52□□□□□ -0.57
HDAC6-201ENST00000334136 I6L893 689 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 GFRA2O00451 464 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 SEMA4FO95754 770 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 IL12AP29459 219 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 ETV4P43268 484 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 ZBED5Q49AG3 693 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 PDZK1Q5T2W1 519 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 TMEM184AQ6ZMB5 413 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 PROX1Q92786 737 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 KIFC1Q9BW19 673 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 DPEP2Q9H4A9 486 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 CARS2Q9HA77 564 aaKnown RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 LHX3Q9UBR4 397 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 INTS6Q9UL03 887 aaKnown RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 SAMHD1Q9Y3Z3 626 aaKnown RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 UBXN8O00124 270 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 MOSPD3O75425 235 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 RSL1D1O76021 490 aaKnown RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 APBB3O95704 486 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 ZNF12P17014 697 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 REXO5Q96IC2 774 aaKnown RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 ZNF638Q14966 1978 aaKnown RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 AXIN1O15169 862 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 BCAS2O75934 225 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 PAPSS2O95340 614 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 ANXA5P08758 320 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 ITGB7P26010 798 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 GRK3P35626 688 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 CAPGP40121 348 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 SLC1A2P43004 574 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 CCNYL2Q5T2Q4 361 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 C11orf96Q7Z7L8 435 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 ARRDC2Q8TBH0 407 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 TMIGD2Q96BF3 282 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 KLHDC7BQ96G42 594 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 NODALQ96S42 347 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 TEX12Q9BXU0 123 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 EVA1BQ9NVM1 165 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 INTS10Q9NVR2 710 aaKnown RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 OPTCQ9UBM4 332 aa11.51□□□□□ -0.57
HDAC6-201ENST00000334136 POLR3HQ9Y535 204 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-201ENST00000334136 H3BN98 237 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 GSTM1P09488 218 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 AQP1P29972 269 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 CSNK1DP48730 415 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 CDK9P50750 372 aaKnown RBP11.5□□□□□ -0.57
HDAC6-201ENST00000334136 MTPNP58546 118 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 AP5B1Q2VPB7 878 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 CEP78Q5JTW2 689 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 ZNF605Q86T29 641 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 ADAMTSL2Q86TH1 951 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 TSPAN33Q86UF1 283 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 GATAD2AQ86YP4 633 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 TMEM132CQ8N3T6 1108 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 RLN3Q8WXF3 142 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 S100ZQ8WXG8 99 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 FERD3LQ96RJ6 166 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 WDR12Q9GZL7 423 aaKnown RBP11.5□□□□□ -0.57
HDAC6-201ENST00000334136 ZBTB26Q9HCK0 441 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 AMBNQ9NP70 447 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 PRSS16Q9NQE7 514 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 IFT80Q9P2H3 777 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-201ENST00000334136 ITM2BQ9Y287 266 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 TPD52L2O43399 206 aaKnown RBP11.5□□□□□ -0.57
HDAC6-201ENST00000334136 ANGPTL1O95841 491 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 AHSGP02765 367 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 C6P13671 934 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 GLULP15104 373 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 SLC16A1P53985 500 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 ATP6V0D1P61421 351 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 KLHL35Q6PF15 583 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 KDELC1Q6UW63 502 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 AKAP14Q86UN6 197 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 AMZ2Q86W34 360 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 TMIEQ8NEW7 156 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 HM13Q8TCT9 377 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 SELENOMQ8WWX9 145 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 EXD2Q9NVH0 621 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 KLHL3Q9UH77 587 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 TMCC3Q9ULS5 477 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 GPC6Q9Y625 555 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-201ENST00000334136 GRXCR2A6NFK2 248 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 ULK1O75385 1050 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 HMGCLP35914 325 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 FCHO2Q0JRZ9 810 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 CLDN19Q8N6F1 224 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 C19orf18Q8NEA5 215 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 NLE1Q9NVX2 485 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-201ENST00000334136 CDC14AQ9UNH5 594 aa11.5□□□□□ -0.57
HDAC6-201ENST00000334136 BBIP1A8MTZ0 92 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 HTRA2O43464 458 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-201ENST00000334136 RGS14O43566 566 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 CCNKO75909 580 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 GGT5P36269 586 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 ACTR1BP42025 376 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 GNPDA1P46926 289 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 POLR2JP52435 117 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms