RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TACR1P25103 407 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 CBSP35520 551 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 NSG1P42857 185 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 MAGEA2P43356 314 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 NEK2P51955 445 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 EMX1Q04741 257 aaPredicted RBP14.95□□□□□ -0.02
BRCC3-201ENST00000330045 CTF1Q16619 201 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 LDLRAP1Q5SW96 308 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 GALNT5Q7Z7M9 940 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 IGFN1Q86VF2 1251 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 CBARPQ8N350 705 aaPredicted RBP14.95□□□□□ -0.02
BRCC3-201ENST00000330045 PIK3C3Q8NEB9 887 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 ZNF347Q96SE7 839 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 C2orf49Q9BVC5 232 aaPredicted RBP14.95□□□□□ -0.02
BRCC3-201ENST00000330045 ELOVL6Q9H5J4 265 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 FBXO10Q9UK96 956 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 PPT2Q9UMR5 302 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 SAMD4AQ9UPU9 718 aaKnown RBP14.95□□□□□ -0.02
BRCC3-201ENST00000330045 PCDHGB1Q9Y5G3 927 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 BACE2Q9Y5Z0 518 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 PIKFYVEQ9Y2I7 2098 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 RFXANKO14593 260 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 HOXA2O43364 376 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 LATS1O95835 1130 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 FUCA1P04066 466 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 CSF2RAP15509 400 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 SLC44A4Q53GD3 710 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 DOK6Q6PKX4 331 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 TPGS1Q6ZTW0 290 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 GPR26Q8NDV2 337 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 SETD9Q8NE22 299 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 TESCQ96BS2 214 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 GPRC5BQ9NZH0 403 aa14.95□□□□□ -0.02
BRCC3-201ENST00000330045 TRIM43BA6NCK2 446 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 M0QX08 132 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 SOCS5O75159 536 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 ZNF682O95780 498 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 PORP16435 677 aaPredicted RBP14.94□□□□□ -0.02
BRCC3-201ENST00000330045 SDC1P18827 310 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 OPRL1P41146 370 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 ARHGDIAP52565 204 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 OCA2Q04671 838 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 CARD16Q5EG05 197 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 CDKL4Q5MAI5 379 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 KIAA1841Q6NSI8 718 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 TTC23LQ6PF05 361 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 TSPAN33Q86UF1 283 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 CYP4Z1Q86W10 505 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 TMCO5AQ8N6Q1 288 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 ZNF461Q8TAF7 563 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 FAR1Q8WVX9 515 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 TRIM43Q96BQ3 446 aaPredicted RBP14.94□□□□□ -0.02
BRCC3-201ENST00000330045 TRMT2BQ96GJ1 504 aaKnown RBP14.94□□□□□ -0.02
BRCC3-201ENST00000330045 SH3YL1Q96HL8 342 aaPredicted RBP14.94□□□□□ -0.02
BRCC3-201ENST00000330045 CLSTN3Q9BQT9 956 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 DOLKQ9UPQ8 538 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 AGAP14A8MT82 685 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 LRATO95237 230 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 EFEMP2O95967 443 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 MAPK1P28482 360 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 CCR7P32248 378 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 MAPK8P45983 427 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 ALDH7A1P49419 539 aaKnown RBP14.94□□□□□ -0.02
BRCC3-201ENST00000330045 BCAP31P51572 246 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 CCR3P51677 355 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 IL1RL1Q01638 556 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 RELAQ04206 551 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 SLC14A1Q13336 389 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 GTF2H3Q13889 308 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 UBE2R2Q712K3 238 aaPredicted RBP14.94□□□□□ -0.02
BRCC3-201ENST00000330045 ZNF551Q7Z340 670 aaPredicted RBP14.94□□□□□ -0.02
BRCC3-201ENST00000330045 PIWIL3Q7Z3Z3 882 aaKnown RBP14.94□□□□□ -0.02
BRCC3-201ENST00000330045 PARP8Q8N3A8 854 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 MCOLN3Q8TDD5 553 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 AUTS2Q8WXX7 1259 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 TBC1D20Q96BZ9 403 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 CMTM7Q96FZ5 175 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 EGLN2Q96KS0 407 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 SLC22A12Q96S37 553 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 BARD1Q99728 777 aaKnown RBP14.94□□□□□ -0.02
BRCC3-201ENST00000330045 RIBC2Q9H4K1 309 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 ATP13A3Q9H7F0 1226 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 YIPF1Q9Y548 306 aa14.94□□□□□ -0.02
BRCC3-201ENST00000330045 KCNE1BA0A087WTH5 132 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 EVPLLA8MZ36 301 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 CLDN25C9JDP6 229 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 PRPH2P23942 346 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 SEMG2Q02383 582 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 SIM2Q14190 667 aaPredicted RBP14.93□□□□□ -0.02
BRCC3-201ENST00000330045 LAPTM4AQ15012 233 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 ACOX1Q15067 660 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 ZXDCQ2QGD7 858 aaPredicted RBP14.93□□□□□ -0.02
BRCC3-201ENST00000330045 GGTA1PQ4G0N0 100 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 OR4F3Q6IEY1 312 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 OR2T5Q6IEZ7 315 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 LRRC70Q7Z2Q7 622 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 ZSWIM9Q86XI8 627 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 OR2T29Q8NH02 315 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 RORBQ92753 470 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 APIPQ96GX9 242 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms