RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 DNMT3AQ9Y6K1 912 aaPredicted RBP13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 PRRC2BQ5JSZ5 2229 aaKnown RBP13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 PABPN1LA6NDY0 278 aaKnown RBP13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 KMOO15229 486 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 WBP4O75554 376 aaKnown RBP13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 HOXA9P31269 272 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 DDX39BQ13838 428 aaKnown RBP13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 TYSND1Q2T9J0 566 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 KIAA1614Q5VZ46 1190 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 ZNF551Q7Z340 670 aaPredicted RBP13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 TLK2Q86UE8 772 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 DHRS1Q96LJ7 313 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 CCDC115Q96NT0 180 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 SH3GL1Q99961 368 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 ACBD6Q9BR61 282 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 CDADC1Q9BWV3 514 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 MMP27Q9H306 513 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 REEP1Q9H902 201 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 OGDHLQ9ULD0 1010 aa13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 PRG3Q9Y2Y8 225 aaPredicted RBP13.93□□□□□ -0.18
CHRNA3-201ENST00000326828 M0R082 166 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 SLC19A1P41440 591 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 TGM4P49221 684 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 KCNQ1P51787 676 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 CRYBB1P53674 252 aaPredicted RBP13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 KIAA0040Q15053 153 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 NEK10Q6ZWH5 1172 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 GALNT7Q86SF2 657 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 ENTHD1Q8IYW4 607 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 CHPFQ8IZ52 775 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 GPR150Q8NGU9 434 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 MAL2Q969L2 176 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 AASDHPPTQ9NRN7 309 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 WBP11Q9Y2W2 641 aaKnown RBP13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 HOXC11O43248 304 aaPredicted RBP13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 FABP3P05413 133 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 HOXB8P17481 243 aaPredicted RBP13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 CXCR2P25025 360 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 PPP3CCP48454 512 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 PSEN2P49810 448 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 ZNF140P52738 457 aaPredicted RBP13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 DEFA1P59665 94 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 DEFA3P59666 94 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 NPRL3Q12980 569 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 CAMK2GQ13555 558 aaPredicted RBP13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 ZNF181Q2M3W8 571 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 ZMAT1Q5H9K5 638 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 ARMCX4Q5H9R4 360 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 THEM5Q8N1Q8 247 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 TMEM132CQ8N3T6 1108 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 HSH2DQ96JZ2 352 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 APOLD1Q96LR9 279 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 TINF2Q9BSI4 451 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 POPDC3Q9HBV1 291 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 GIMAP4Q9NUV9 329 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 NLE1Q9NVX2 485 aaPredicted RBP13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 MARCH2Q9P0N8 246 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 BTBD3Q9Y2F9 522 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 DNAJB5O75953 348 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 RPS24P62847 133 aaKnown RBP13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 SMARCB1Q12824 385 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 PRSS48Q7RTY5 328 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 GALNT12Q8IXK2 581 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 SPPL2AQ8TCT8 520 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 KATNBL1Q9H079 304 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 MMP28Q9H239 520 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 TMEM248Q9NWD8 314 aa13.92□□□□□ -0.18
CHRNA3-201ENST00000326828 CENPXA8MT69 81 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 PTHP01270 115 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 POU1F1P28069 291 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 IL10RBQ08334 325 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 ARMC4Q5T2S8 1044 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 FAM171BQ6P995 826 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 C16orf59Q7L2K0 433 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 NPLOC4Q8TAT6 608 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 ZNF675Q8TD23 568 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 UBASH3BQ8TF42 649 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 CLIP3Q96DZ5 547 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 PANX1Q96RD7 426 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 PNMA8CA0A1B0GUJ8 204 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 EVPLLA8MZ36 301 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 M0QX08 132 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 M0QZ92 97 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 PRAMEF12O95522 483 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 CSF2P04141 144 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 IL6P05231 212 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 ALPIP09923 528 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 NUDT7P0C024 238 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 ITGAMP11215 1152 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 LPOP22079 712 aaPredicted RBP13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 OR1E2P47887 323 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 CDC42EP1Q00587 391 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 ACVR1Q04771 509 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 MXD1Q05195 221 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 EIF4EBP2Q13542 120 aaPredicted RBP13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 TRAF7Q6Q0C0 670 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 CYP4Z2PQ8N1L4 340 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 ELMOD1Q8N336 334 aa13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 ASCC1Q8N9N2 400 aaKnown RBP13.91□□□□□ -0.18
CHRNA3-201ENST00000326828 LKAAEAR1Q8TD35 194 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms