RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 KLHL35Q6PF15 583 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 HOMEZQ8IX15 550 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 KIRREL3Q8IZU9 778 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 EID2Q8N6I1 236 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 SNX31Q8N9S9 440 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 SLC22A18Q96BI1 424 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 MOCOSQ96EN8 888 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 APOLD1Q96LR9 279 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 C7orf26Q96N11 449 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 NSUN5Q96P11 429 aaKnown RBP13.15□□□□□ -0.3
PRPF18-201ENST00000320054 OR4K3Q96R72 315 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 ZNF382Q96SR6 550 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 SLC38A3Q99624 504 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 NRTNQ99748 197 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 NTMT1Q9BV86 223 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 EDEM2Q9BV94 578 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 EPB41L1Q9H4G0 881 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 IPPKQ9H8X2 491 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 TMEM9BQ9NQ34 198 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 EVA1BQ9NVM1 165 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 LRIT1Q9P2V4 623 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 HAO1Q9UJM8 370 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 HCN4Q9Y3Q4 1203 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 PCDHB11Q9Y5F2 797 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 ENTPD2Q9Y5L3 495 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 KCNE2Q9Y6J6 123 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 RNF215Q9Y6U7 377 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 ZNF292O60281 2723 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 UNC13CQ8NB66 2214 aa13.15□□□□□ -0.31
PRPF18-201ENST00000320054 USP34Q70CQ2 3546 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 MDC1Q14676 2089 aaKnown RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 LY6G6EA0A0G2JKS1 128 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 MATN2O00339 956 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 BTN3A3O00478 584 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 OR7A17O14581 309 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 ITM2AO43736 263 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 UGDHO60701 494 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 SHOX2O60902 331 aaPredicted RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 CCNDBP1O95273 360 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 FKBP9O95302 570 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 HSPA4LO95757 839 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 OTCP00480 354 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 GNAZP19086 355 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 EPORP19235 508 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 TGM1P22735 817 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 DUSP3P51452 185 aaPredicted RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 ABATP80404 500 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 PRKAA1Q13131 559 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 E2F2Q14209 437 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 THEMIS2Q5TEJ8 643 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 SUSD1Q6UWL2 747 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 ATG14Q6ZNE5 492 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 PRR23CQ6ZRP0 262 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 RPS27LQ71UM5 84 aaKnown RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 OOSP2Q86WS3 158 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 C2orf73Q8N5S3 287 aaPredicted RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 OR2A1Q8NGT9 310 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 TRPC4APQ8TEL6 797 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 AGAP11Q8TF27 550 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 JPH3Q8WXH2 748 aaPredicted RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 NAT6Q93015 286 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 WDR34Q96EX3 536 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 MAGEB10Q96LZ2 347 aaPredicted RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 ZNF317Q96PQ6 595 aaPredicted RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 SORT1Q99523 831 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 TBC1D10AQ9BXI6 508 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 C20orf27Q9GZN8 174 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 ILKAPQ9H0C8 392 aaPredicted RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 NOL11Q9H8H0 719 aaKnown RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 PARD6AQ9NPB6 346 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 SEMA4BQ9NPR2 832 aaPredicted RBP13.14□□□□□ -0.31
PRPF18-201ENST00000320054 ACSS2Q9NR19 701 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 RAP2CQ9Y3L5 183 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 U3KQA8 63 aa13.14□□□□□ -0.31
PRPF18-201ENST00000320054 PIPSLA2A3N6 862 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 EME2A4GXA9 379 aaPredicted RBP13.13□□□□□ -0.31
PRPF18-201ENST00000320054 OR6C74A6NCV1 312 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 OR5K3A6NET4 321 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 C2orf74A8MZ97 194 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 UBFD1O14562 309 aaKnown RBP13.13□□□□□ -0.31
PRPF18-201ENST00000320054 CLGNO14967 610 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 ZW10O43264 779 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 EDF1O60869 148 aaKnown RBP13.13□□□□□ -0.31
PRPF18-201ENST00000320054 LYPLA1O75608 230 aaPredicted RBP13.13□□□□□ -0.31
PRPF18-201ENST00000320054 UBXN7O94888 489 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 ESRRBO95718 433 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 PROS1P07225 676 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 CHRNGP07510 517 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 FGF4P08620 206 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 EBLN1P0CF75 366 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 CKMT1AP12532 417 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 PEBP1P30086 187 aaKnown RBP13.13□□□□□ -0.31
PRPF18-201ENST00000320054 CASP2P42575 452 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 CCR10P46092 362 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 CCNG1P51959 295 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 SH3BP2P78314 561 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 PRDX1Q06830 199 aaKnown RBP13.13□□□□□ -0.31
PRPF18-201ENST00000320054 TRAF3Q13114 568 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 TSTA3Q13630 321 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms