RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 C1DQ13901 141 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 COQ5Q5HYK3 327 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 ZC3H12BQ5HYM0 836 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 DEF8Q6ZN54 512 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 CMTR2Q8IYT2 770 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 EXOSC8Q96B26 276 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 SCRN2Q96FV2 425 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 TIMMDC1Q9NPL8 285 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 PHPT1Q9NRX4 125 aaPredicted RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 SELENONQ9NZV5 590 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 SNTNA6NMZ2 147 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 SOCS2O14508 198 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 ZNF195O14628 629 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 TSPAN6O43657 245 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 SNAP29O95721 258 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 PRKACGP22612 351 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 CHST14Q8NCH0 376 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 PIK3C3Q8NEB9 887 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 CMTM7Q96FZ5 175 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 UBAP1Q9NZ09 502 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 NCKAP1Q9Y2A7 1128 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 TMA7Q9Y2S6 64 aaKnown RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 TMED5Q9Y3A6 229 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 PI15O43692 258 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 CACNG3O60359 315 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 OR10H3O60404 316 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 DIRAS1O95057 198 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 DLGAP3O95886 979 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 ABHD18Q0P651 414 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 CTSL3PQ5NE16 218 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 PLEKHS1Q5SXH7 462 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 LCN8Q6JVE9 175 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 ANKRD26P1Q6NSI1 321 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 CES5AQ6NT32 575 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 CHST15Q7LFX5 561 aaPredicted RBP13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 FAM124AQ86V42 546 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 ZFP28Q8NHY6 868 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 FATE1Q969F0 183 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 CCNB1IP1Q9NPC3 277 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 TLR9Q9NR96 1032 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 TEKT2Q9UIF3 430 aa13.06□□□□□ -0.32
PCDHB9-201ENST00000316105 SCAMP1O15126 338 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 SLC28A2O43868 658 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 GBAP04062 536 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 OCM2P0CE71 109 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 OCMP0CE72 109 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 CTSOP43234 321 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 APLP1P51693 650 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 PNLIPRP1P54315 467 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 ARSFP54793 590 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 PCBP2Q15366 365 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 DEPDC1Q5TB30 811 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 OGFOD2Q6N063 350 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 PPP4R4Q6NUP7 873 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 DEPDC4Q8N2C3 294 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TTC29Q8NA56 475 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 SLC30A3Q99726 388 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 SLC29A1Q99808 456 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 CCDC3Q9BQI4 270 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 MCMBPQ9BTE3 642 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 LIN28AQ9H9Z2 209 aaKnown RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 SMURF2Q9HAU4 748 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 LHX3Q9UBR4 397 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 DGKBQ9Y6T7 804 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TBC1D3DA0A087WVF3 549 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TBC1D3IA0A087WXS9 549 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TBC1D3EA0A087X179 549 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TBC1D3KA0A087X1G2 549 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TBC1D3FA6NER0 549 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TBC1D3LB9A6J9 549 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TBC1D3HP0C7X1 549 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 ALDH3A2P51648 485 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TMEM115Q12893 351 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TRAF3Q13114 568 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 HSF5Q4G112 596 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TBC1D3GQ6DHY5 549 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TBC1D3CQ6IPX1 549 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TBC1D3Q8IZP1 549 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 OR8J3Q8NGG0 315 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 KLK6Q92876 244 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 RHBGQ9H310 441 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 FARSBQ9NSD9 589 aaKnown RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 PSME2Q9UL46 239 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 ERVW-1Q9UQF0 538 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 COQ6Q9Y2Z9 468 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 EP400Q96L91 3159 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 LINC00854A0A1B0GVQ3 168 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 MMP20O60882 483 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 GSRP00390 522 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 PABPC4LP0CB38 370 aaKnown RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 SPINT3P49223 89 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 CDH12P55289 794 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 HTRA3P83110 453 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 SP140Q13342 867 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 DUOXA1Q1HG43 343 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 KIAA1324Q6UXG2 1013 aaKnown RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 AHSA2Q719I0 299 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 RETREG3Q86VR2 466 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 AMZ2Q86W34 360 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms