RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CNTN6Q9UQ52 1028 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 DIP2CQ9Y2E4 1556 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 TLL1O43897 1013 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 NKD2Q969F2 451 aaPredicted RBP15.15■□□□□ 0.02
HCFC1-201ENST00000310441 USP29Q9HBJ7 922 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 CLCA3PQ9Y6N3 262 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 A0A1W2PQ45 241 aaPredicted RBP15.15■□□□□ 0.02
HCFC1-201ENST00000310441 A0A1W2PQY0 241 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 SPARCP09486 303 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 LAG3P18627 525 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 GDI2P50395 445 aaKnown RBP15.15■□□□□ 0.02
HCFC1-201ENST00000310441 DSG2Q14126 1118 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 GTF2IRD2BQ6EKJ0 949 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 GTF2IRD2Q86UP8 949 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 FAM129CQ86XR2 697 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 WDSUB1Q8N9V3 476 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 ZNF420Q8TAQ5 688 aaPredicted RBP15.15■□□□□ 0.02
HCFC1-201ENST00000310441 TCEAL4Q96EI5 215 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 TAS2R14Q9NYV8 317 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 SLC17A7Q9P2U7 560 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 PIRTP0C851 137 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 IFI30P13284 250 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 ENDOUP21128 410 aaKnown RBP15.15■□□□□ 0.02
HCFC1-201ENST00000310441 OR14K1Q8NGZ2 314 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 MAGED1Q9Y5V3 778 aaPredicted RBP15.15■□□□□ 0.02
HCFC1-201ENST00000310441 ARL5AQ9Y689 179 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 KIF13AQ9H1H9 1805 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 GKN3PP0CG01 181 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 RYKP34925 604 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 SYT16Q17RD7 645 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 PLA2G4EQ3MJ16 856 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 TMEM164Q5U3C3 297 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 CMC1Q7Z7K0 106 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 VSIG10LQ86VR7 867 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 GPR21Q99679 349 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 DUSP26Q9BV47 211 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 RNF208Q9H0X6 261 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 SNX10Q9Y5X0 201 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 HTR3EA5X5Y0 456 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 IFNA4P05014 189 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 CORO1AP31146 461 aaKnown RBP15.15■□□□□ 0.02
HCFC1-201ENST00000310441 NRG1Q02297 640 aaPredicted RBP15.15■□□□□ 0.02
HCFC1-201ENST00000310441 OGFOD2Q6N063 350 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 TAS2R10Q9NYW0 307 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 PTPRMP28827 1452 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 YDJCA8MPS7 323 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 DNAJB5O75953 348 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 IL3P08700 152 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 VAMP1P23763 118 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 GFOD2Q3B7J2 385 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 FEM1AQ9BSK4 669 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 ITPAQ9BY32 194 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 OR6C70A6NIJ9 312 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 PGLSO95336 258 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 CPN2P22792 545 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 AGTR1P30556 359 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 ZNF45Q02386 682 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 FSTL4Q6MZW2 842 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 GID4Q8IVV7 300 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 MRPL41Q8IXM3 137 aaKnown RBP15.15■□□□□ 0.02
HCFC1-201ENST00000310441 ZIM2Q9NZV7 527 aa15.15■□□□□ 0.02
HCFC1-201ENST00000310441 ARPC2O15144 300 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 SLC19A2O60779 497 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 GLUD2P49448 558 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 CHAF1BQ13112 559 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 CHIT1Q13231 466 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 HID1Q8IV36 788 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 ZBTB45Q96K62 511 aaPredicted RBP15.14■□□□□ 0.01
HCFC1-201ENST00000310441 EXOC2Q96KP1 924 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 ISPDA4D126 451 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 I3L521 148 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 SCARB2Q14108 478 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 RNF220Q5VTB9 566 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 C9orf131Q5VYM1 1079 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 SHKBP1Q8TBC3 707 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 SPATA31A5Q5VU36 1347 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 SPATA31A7Q8IWB4 1347 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 KNTC1P50748 2209 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 AGPSO00116 658 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 UGT1A9O60656 530 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 HCKP08631 526 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 UGT1A6P19224 532 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 UGT1A1P22309 533 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 UGT1A4P22310 534 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 PEX2P28328 305 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 TLE3Q04726 772 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 CYP2W1Q8TAV3 490 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 FCAMRQ8WWV6 532 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 DGAT2Q96PD7 388 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 TMEM109Q9BVC6 243 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 DCSTAMPQ9H295 470 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 UGT1A7Q9HAW7 530 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 UGT1A10Q9HAW8 530 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 UGT1A8Q9HAW9 530 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 IL17RBQ9NRM6 502 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 AMZ2Q86W34 360 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 UPF1Q92900 1129 aaKnown RBP eCLIP15.14■□□□□ 0.019e-10■■■■■ 41.6
HCFC1-201ENST00000310441 M0R233 179 aa15.14■□□□□ 0.01
HCFC1-201ENST00000310441 EIF1AYO14602 144 aaKnown RBP15.14■□□□□ 0.01
HCFC1-201ENST00000310441 SCAMP3O14828 347 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms