RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PCDHGB3Q9Y5G1 929 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 C1orf232A0A0U1RR37 186 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 GLP2RO95838 553 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 PTTG1O95997 202 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 ANXA6P08133 673 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 HSPA8P11142 646 aaKnown RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 TACR2P21452 398 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 IL10P22301 178 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 CD86P42081 329 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 BRCC3P46736 316 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 BFSP2Q13515 415 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 INAQ16352 499 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 MPP7Q5T2T1 576 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 CERS6Q6ZMG9 384 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 TRILQ7L0X0 811 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 SLCO6A1Q86UG4 719 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 STK40Q8N2I9 435 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 GLB1L3Q8NCI6 653 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 S100ZQ8WXG8 99 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 WDFY2Q96P53 400 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 CDK15Q96Q40 435 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 RBM4BQ9BQ04 359 aaKnown RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 INPP5KQ9BT40 448 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 EFHD1Q9BUP0 239 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 RBM4Q9BWF3 364 aaKnown RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 SLC29A3Q9BZD2 475 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 TLR8Q9NR97 1041 aaKnown RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 ACOXLQ9NUZ1 547 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 MBD1Q9UIS9 605 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 RNF6Q9Y252 685 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 TICRRQ7Z2Z1 1910 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 TSPAN11A1L157 253 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 MTMR11A4FU01 709 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 DFFAO00273 331 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 GUCY1B2O75343 617 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 CLDN11O75508 207 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 ZNF821O75541 412 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 HMGA1P17096 107 aaKnown RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 SLC6A4P31645 630 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 EIF2B2P49770 351 aaKnown RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 NKX2-5P52952 324 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 MAXP61244 160 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 BEX3Q00994 111 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 MAPK11Q15759 364 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 TBCEQ15813 527 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 ATAD3CQ5T2N8 411 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 ZCCHC8Q6NZY4 707 aaKnown RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 LYPD8Q6UX82 237 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 GOLGA7Q7Z5G4 137 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 KIAA0907Q7Z7F0 614 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 C8orf59Q8N0T1 100 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 KRTCAP2Q8N6L1 136 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 GALNT6Q8NCL4 622 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 EEF1AKMT1Q8WVE0 214 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 TTC9Q92623 222 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 HPS1Q92902 700 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 LPPQ93052 612 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 ECHDC3Q96DC8 303 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 NRBF2Q96F24 287 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 DHRS1Q96LJ7 313 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 MAGEB10Q96LZ2 347 aaPredicted RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 BDH2Q9BUT1 245 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 FSD1LQ9BXM9 530 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 CLPBQ9H078 707 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 MIXL1Q9H2W2 232 aa5.3□□□□□ -1.56
VPS50-202ENST00000305866 RC3H2Q9HBD1 1191 aaKnown RBP5.3□□□□□ -1.56
VPS50-202ENST00000305866 CARNS1A5YM72 827 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 NPEPPSL1A6NEC2 478 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 INSIG1O15503 277 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 GPR39O43194 453 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 DYRK3O43781 588 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 KATNA1O75449 491 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 CREG1O75629 220 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 STAMBPO95630 424 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 GPX2P18283 190 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 NFKBIAP25963 317 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 ITGB7P26010 798 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 DDOSTP39656 456 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 TTPAP49638 278 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 RACK1P63244 317 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 RAE1P78406 368 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 CYP4F3Q08477 520 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 NFYCQ13952 458 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 ELOAQ14241 798 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 PTGR1Q14914 329 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 GPRC6AQ5T6X5 926 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 RNLSQ5VYX0 342 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 FRA10AC1Q70Z53 315 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 CLIP4Q8N3C7 705 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 DNAJC22Q8N4W6 341 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 TESCQ96BS2 214 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PABPC5Q96DU9 382 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 KLHL5Q96PQ7 755 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SPATA9Q9BWV2 254 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 IL17CQ9P0M4 197 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 UXTQ9UBK9 157 aaPredicted RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 SEPT3Q9UH03 358 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 DLGAP4Q9Y2H0 992 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 CRYL1Q9Y2S2 319 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 TNPO3Q9Y5L0 923 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms