RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 CBSP35520 551 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 DNAJB13P59910 316 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 ADAM17P78536 824 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 GRB14Q14449 540 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 SMCO1Q147U7 214 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 SYT16Q17RD7 645 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 ZNF678Q5SXM1 525 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 NUDT13Q86X67 352 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 OR5AK3PQ8NH89 298 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 C9orf43Q8TAL5 461 aaPredicted RBP20.57■□□□□ 0.88
LETM1-201ENST00000302787 SPATA7Q9P0W8 599 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 A0A1W2PRU2 124 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 TPTEP56180 551 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 MPP2Q14168 576 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 COLEC12Q5KU26 742 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 SEC14L1Q92503 715 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 MALT1Q9UDY8 824 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 IL36AQ9UHA7 158 aa20.57■□□□□ 0.88
LETM1-201ENST00000302787 GPN3Q9UHW5 284 aaPredicted RBP20.57■□□□□ 0.88
LETM1-201ENST00000302787 LOC100130705A0A1B0GUX0 176 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 SRPRAP08240 638 aaKnown RBP20.56■□□□□ 0.88
LETM1-201ENST00000302787 CCR8P51685 355 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 IDNKQ5T6J7 187 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 COMMD3Q9UBI1 195 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 ASB3Q9Y575 518 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 NALCNQ8IZF0 1738 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 LCHNA4D1U4 455 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 HSD17B2P37059 387 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 RABL3Q5HYI8 236 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 CCDC106Q9BWC9 280 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 MAGEE1Q9HCI5 957 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 ZCCHC3Q9NUD5 404 aaKnown RBP20.56■□□□□ 0.88
LETM1-201ENST00000302787 POFUT2Q9Y2G5 429 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 SPIN1Q9Y657 262 aaPredicted RBP20.56■□□□□ 0.88
LETM1-201ENST00000302787 ORC5O43913 435 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 CLDN7O95471 211 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 AVPR1BP47901 424 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 DNASE1L1P49184 302 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 PPP1R8Q12972 351 aaKnown RBP20.56■□□□□ 0.88
LETM1-201ENST00000302787 PDCD4Q53EL6 469 aaKnown RBP20.56■□□□□ 0.88
LETM1-201ENST00000302787 BRI3BPQ8WY22 251 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 ITM2CQ9NQX7 267 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 TMEM248Q9NWD8 314 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 THUMPD1Q9NXG2 353 aaKnown RBP20.56■□□□□ 0.88
LETM1-201ENST00000302787 TMED5Q9Y3A6 229 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 A0A0G2JN53 185 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 ATP1B2P14415 290 aaPredicted RBP20.56■□□□□ 0.88
LETM1-201ENST00000302787 CRB2Q5IJ48 1285 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 GEMIN6Q8WXD5 167 aaKnown RBP20.56■□□□□ 0.88
LETM1-201ENST00000302787 RAB11FIP5Q9BXF6 653 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 TMEM165Q9HC07 324 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 TXNRD2Q9NNW7 524 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 HEBP2Q9Y5Z4 205 aa20.56■□□□□ 0.88
LETM1-201ENST00000302787 MAT2AP31153 395 aaKnown RBP20.55■□□□□ 0.88
LETM1-201ENST00000302787 AKT2P31751 481 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 RAB15P59190 212 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 MINDY2Q8NBR6 621 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 CRELD1Q96HD1 420 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 COL21A1Q96P44 957 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 COL14A1Q05707 1796 aaKnown RBP20.55■□□□□ 0.88
LETM1-201ENST00000302787 TLR4O00206 839 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 SLC31A1O15431 190 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 GDF5P43026 501 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 OR2AP1Q8NGE2 309 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 WFIKKN2Q8TEU8 576 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 ZNF641Q96N77 438 aaPredicted RBP20.55■□□□□ 0.88
LETM1-201ENST00000302787 CCM2Q9BSQ5 444 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 ADAM7Q9H2U9 754 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 DAPL1A0PJW8 107 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 KDELR3O43731 214 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 INHAP05111 366 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 PYURFQ96I23 114 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 ZSCAN5AQ9BUG6 496 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 PRAMEF33A0A0G2JMD5 474 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 FAM189A1O60320 539 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 PRAMEF10O60809 474 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 MINDY4Q4G0A6 757 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 SCLYQ96I15 445 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 CAMK1GQ96NX5 476 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 GIMAP2Q9UG22 337 aa20.55■□□□□ 0.88
LETM1-201ENST00000302787 ACOX3O15254 700 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 THOC6Q86W42 341 aaKnown RBP20.54■□□□□ 0.88
LETM1-201ENST00000302787 TREML1Q86YW5 311 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 SIX5Q8N196 739 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 OR8H1Q8NGG4 311 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 NEK7Q8TDX7 302 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 CRTAC1Q9NQ79 661 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 PFDN2Q9UHV9 154 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 RIMKLBQ9ULI2 386 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 RSL1D1O76021 490 aaKnown RBP20.54■□□□□ 0.88
LETM1-201ENST00000302787 PRAMEF12O95522 483 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 S100A9P06702 114 aaKnown RBP20.54■□□□□ 0.88
LETM1-201ENST00000302787 GGT5P36269 586 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 PUDPQ08623 228 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 PRAMEF14Q5SWL7 426 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 PRAMEF13Q5VWM6 474 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 FARSBQ9NSD9 589 aaKnown RBP20.54■□□□□ 0.88
LETM1-201ENST00000302787 Q9Y3F1 56 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 CNTN5O94779 1100 aa20.54■□□□□ 0.88
LETM1-201ENST00000302787 MPIP34949 423 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms